Pseudomonas sp. W03: SD196_04505
Help
Entry
SD196_04505 CDS
T11012
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswo02044
]
SD196_04505
02035 Bacterial motility proteins [BR:
pswo02035
]
SD196_04505
Secretion system [BR:
pswo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SD196_04505
Bacterial motility proteins [BR:
pswo02035
]
Pilus system
Pilus assembly proteins
SD196_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Top6b_C
Motif
Other DBs
NCBI-ProteinID:
XOT23474
LinkDB
All DBs
Position
complement(950757..954491)
Genome browser
AA seq
1244 aa
AA seq
DB search
MHRSRLHPCIKTLSCAVFGVTLLCAANSFAAVSQSPLSLTVGVAPNMLLTLDDSGSMRWA
FAPDNKNSYSATRRAKSSAFNPLAYNPAVTYRAPIVFDTSGNEVPLSTSFTSAKVNGYNS
ARGTINMSNDYKVTWTYVLESGQATSYGYSSTSNRLAENPAADFQASVTATVDGTTTVTT
PGGIDFTFKRTSTQTCGRRCTTTVSCTASATVPGSTSAIATDCSVNGNTLSASLAQKGVP
AYYYTYNSTNAGCTTANDDCYSLRFVTSAEQQNFANWYSFYRNRALATISAAALAFYDLS
PAVRLSWQGLGRCVSFDGTDSNCRDNTFQAYTPAHKGQLYAWLQNINFDQSTYLPAAMKR
AGEFLKTATPWQKTPGGTGNTSQNTYACRASYQIMMTDGLWNESASAPSDFRHDAGTFNL
PDGRAYSQGAPYYDATSNTLADLAMHYWSTDLNTNLANKVPAYTPFKSNNTTTDYWDARN
DPATWQHMSNFIMGLGLSEALNRTNIPWDGATHKGAGYAALAAGTATWPPAAASGDNAAN
NVYDLWHAAINSRGEFFSVDSPEAMVQAFSDILSRIADRKSTAARPAINSGQVSTDENDN
GTVKTVSYQTSYASDDHWSGDVKRFEKTWNAQSNAFETTQIWSAKAGVPSWQSRAIKIAG
NSNSGLVDFAWENAGTSSTTGSLANLLSRDPANANAADTQGQQRLEYLRGNRSGEGTTFR
QRSGVLGDFYSSSPAVVNGPRYLVSFSNRLEGNTAYSTFATAIADRSPRVYVGGNDGMLH
GFNALTGAEEFAFIPSAVFAKLNKLTSANYSHEFYVEGTPVVADVYDGSEWRTVLVGTLK
GGGKAIFALDITTPGQEKLLWEFDDSRLPNDAAVKMGYSFSQPTIARLHTGKWAVVFGNG
YESDGNTNGKAALFIVDAMQGTLLKSLEVEGTDGVANGLSTPKLGDYNADGVADYAYAGD
LQGNVWRFDLLRNGRSTTTPFTTEDDGENAIAAFEVAYGGKPLFKAVADTGSRQPITSAP
SLVRHPTGTGYLVIFGTGKFFDTDDKEGDKSMAQSVYGIWDKQTLGEEASNPAITRGSLQ
AQSIVTQTTVAADGTTRQGRVISDNNVRWQASGSQSAQNGWYLNLTRTDGEMVVENMAQL
GRTLFFQSLVPNDDPCGDGAANWTYALNPFTGGRTPQHAFDYQPTGDVGTSNISAIRQDG
EGGGTISQNSDSSYQYCTGQECVNIHPDPTSLGRQSWRRVEDQE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttctcgtcttcacccctgcatcaagacgctctcctgcgcagtgttcggcgtc
accctgctctgcgccgccaactcctttgccgccgtctcccagagccctctgagcctgacc
gtgggtgtcgcccccaacatgctgctgacactcgacgactccggcagcatgcgctgggcc
ttcgccccggacaacaagaacagctacagcgccacccggcgcgccaagtccagcgccttc
aacccgctcgcctataaccccgctgtgacttatcgcgccccgatcgtgttcgacacctcg
ggcaatgaagtcccgctgagcaccagctttacctcggcgaaggtcaacggctacaacagc
gcacgcggcaccatcaatatgtccaacgactacaaggtcacctggacttacgtgctcgaa
agtgggcaagccacgagctacggctacagcagcaccagtaaccgactggcggaaaacccg
gcagctgacttccaggcatccgtcaccgcgaccgtcgatggcaccacgactgtgaccaca
ccaggcggcatcgatttcaccttcaagcgcacctctacccagacttgcgggagaagatgc
accacgacagtcagttgcaccgcttccgccaccgtaccaggctccaccagcgccattgcc
acggattgcagcgtgaacggcaatacgctgtcggccagcctcgctcaaaaaggagttccg
gcctactactacacctacaactccactaatgccggttgcaccaccgctaacgacgactgc
tacagcctgaggttcgtaacgtctgccgagcagcagaacttcgcgaactggtattcgttc
taccgaaaccgcgctctggcgacgatctcggccgcggcgctggccttctacgacctgtct
cctgcggtgcgcctgagctggcaaggcctgggtcgctgcgtcagcttcgacggaaccgac
agcaactgccgggacaacaccttccaggcctatacgccagcgcacaaggggcaactgtat
gcctggctgcagaacatcaacttcgaccagagcacatacctgccagcggcaatgaagcgc
gcgggcgaattcctcaagacggccacaccctggcagaagacgcccggcggcaccggcaac
acctcgcaaaatacctatgcctgccgtgccagctaccagatcatgatgacggacggtctg
tggaacgaatcggccagcgcgccaagcgacttccgccacgacgccggcaccttcaacctg
ccggacggccgggcatacagtcagggcgccccttactacgacgccacgtccaacaccctg
gctgacctcgccatgcactactggtccacggacctcaataccaacctggccaacaaggtg
ccggcctacacgcccttcaagagcaacaacaccacgaccgattactgggatgcccgcaat
gacccggcgacctggcaacacatgtccaacttcatcatgggcctgggactgtccgaagcg
ctaaatcgcacgaacattccctgggatggcgccacccacaagggggccggctatgccgcc
ctggccgccggtacggcaacctggccaccggctgccgcctcgggcgacaacgccgccaac
aacgtctacgacctgtggcacgccgcgatcaactcgcgcggcgagttcttcagcgtggac
agcccggaggccatggtacaggccttctccgacattctttcgcgcatcgccgaccgcaag
tccaccgccgcacgcccggccatcaactccggccaggtcagcacggacgagaacgacaac
ggcacggtcaagaccgtttcctaccaaacctcctacgccagcgacgaccactggtccggg
gacgtgaagcgcttcgagaaaacctggaacgcccagagcaacgcttttgaaaccacccag
atctggagcgccaaggcgggcgtgcccagttggcagagccgggcgatcaagatagcggga
aattccaacagcgggctggtcgacttcgcctgggaaaatgcaggcaccagcagcaccacc
ggcagcctggccaacctgcttagccgggacccggcaaacgccaatgccgccgacacccag
ggacagcagcgcctggaatacctgcgtggcaaccgtagtggcgaaggcaccaccttccgt
cagcgcagcggtgtcctgggtgacttctactcctccagccccgccgtcgtgaatggcccc
cgttacctggtcagcttcagcaaccgtctggagggaaacaccgcctactccacctttgcg
accgccattgccgaccgctcgccccgtgtctacgtgggcggcaacgacggcatgctgcat
ggattcaatgcccttaccggtgccgaggagttcgcgttcatcccaagcgccgtgttcgcc
aagctgaacaagctgaccagcgccaactacagccacgagttctatgtggaaggcactccc
gtcgtcgccgatgtgtacgacggcagcgaatggcgcacggtcctggtcggcaccctgaag
ggcggtggcaaggccatcttcgccctggacatcaccacgcccgggcaggagaaactgctg
tgggagttcgacgacagccgccttcccaatgatgcggcggtgaagatgggctacagcttc
tcgcaaccgaccatcgctcgcctgcataccggtaaatgggccgtggtcttcggcaacggc
tacgaaagcgacggcaacaccaacggcaaggccgccctgttcatcgtcgatgcgatgcaa
ggcaccttgctcaagagcctggaagtcgaaggtaccgacggggtcgccaacggcctgtcc
acccccaagctcggcgactacaacgccgacggcgtggccgactacgcctacgcgggcgac
ctgcaaggcaacgtctggcgcttcgacctgctacgcaacggccggagcaccaccacccca
tttaccaccgaggacgacggcgagaacgccatcgcggccttcgaagtggcctatggaggc
aaaccgctgttcaaggccgtggcggataccggcagccggcagcccatcacctccgccccc
agcctggtacgccacccgaccggtacgggctacctggtgatcttcggcacgggaaagttc
ttcgacaccgacgacaaggaaggcgacaagagcatggcccagagcgtctacggcatctgg
gacaaacagaccctgggcgaggaagccagcaaccccgccatcacccgcggcagtttgcaa
gcgcagagcattgttacgcaaaccactgttgccgccgatggaacaacccggcaagggcgt
gtgatcagcgacaacaacgtgcgctggcaggcctcgggcagtcagtccgcgcagaacggc
tggtacctgaacctgacccggactgacggtgaaatggttgtggaaaacatggcgcaactg
gggcggaccctgttcttccagtcgctggtgcccaatgacgacccctgcggtgacggcgcc
gccaactggacttacgcgctcaaccctttcaccggaggcagaacaccccagcacgccttc
gattaccagcccacaggcgacgtcggcaccagcaacatctcggcgatccgccaggacggt
gaaggcggcgggaccatctcccagaactcggacagctcgtaccagtactgcaccggacag
gagtgcgtgaacatccacccggacccgaccagcctcggtcgacagagctggcgcagagtc
gaggaccaggaatga
DBGET
integrated database retrieval system
