Pseudomonas sp. W03: SD196_04600
Help
Entry
SD196_04600 CDS
T11012
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
XOT23490
LinkDB
All DBs
Position
971553..973445
Genome browser
AA seq
630 aa
AA seq
DB search
MAVETIGLVAVSENAARKVAVKAGGKIKAHEGTKYLLQVENNDIAPENVTVKREGDDLQI
TFEGSEKPDLTIQNFFADGMDGQLYGVAEDRQLYAYVRTDGEGFDGHLLVADGESAPISL
GGDSLADGSPYLASTFEEAAGFVMWPWLLGLAGVGAAAAAIIHHNNDDGHHHTATSPAPS
NSVATDGVGPIQGQLSNGDVTDDAHPALSGNGVPGAIIHIIDNGQEIASTTVSPDGVWSY
TAELADGLHNIDVTQELPGEKPSAPLKVIDLVVDTVAPAAPEAWLAPASGSDVKGDDVTS
NQTPTIDGKAEPGVDVAVTFSTGEVIHAKADENGDWSLAPTQVLPAGNNEISLIATDPAG
NQSETTLLPITIETPASTTPKGGDVTSDVAPNDSAPVIAVSDAAPGDIIHQIGGGTGQDS
TPVASAVAEGYGSNASLLDTGSMSTPVGAYVIQSFSYESTGNTAGRIEVTGDQVSSYVTS
NPASVTPAAGGDALSMPTEPPAYAAHDSTHIFAGSGLDTLELAGANQGPDLRGLSADNGQ
VRIEKPDFAGDKALTVSLNDVLSQGESDLFQKGSESKVTVDGDALNGHPDHGSATWQDTG
TTTLGSSIFQGHSQLDAEALIKQAVASSIV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggaaactatcggtcttgtcgccgtctctgagaatgcagccaggaaggttgca
gtcaaggccggtggaaagatcaaggcacatgaaggtaccaagtaccttctccaggtagaa
aacaacgatatcgctcccgagaacgtcaccgtcaagcgcgaaggtgatgacctgcagatc
accttcgagggcagcgaaaaacctgatctgaccatccagaacttcttcgctgacggcatg
gatggccagctctacggggttgccgaagatcgtcagttgtatgcgtatgtgcgtaccgat
ggcgaaggcttcgacggtcacctgctggtggccgatggtgagtccgcccccattagcctg
ggcggcgactccctggcggacggcagcccttacctggcgtccaccttcgaggaggcggcg
ggcttcgtcatgtggccctggctgcttggcctggctggcgtaggcgccgctgccgcagcc
atcatccatcacaacaacgatgacggtcatcaccacaccgcgaccagtcctgcgccgagc
aattccgtcgctaccgacggtgtcggcccgatccagggccagctgtccaacggcgatgtc
actgacgatgcgcatccggccctctccggcaatggcgtaccgggggcaatcatccacatc
atcgacaatggccaggaaatcgcttccaccaccgtgtcgccggatggcgtctggtcctat
accgcagaactggccgacggcctgcacaacatcgatgtcacccaggagctccccggcgag
aagcccagcgccccgctcaaggtgatcgatctcgtcgttgacactgtcgctcctgccgct
ccagaggcctggcttgctcctgcctcgggcagcgatgtcaagggcgacgacgtcaccagc
aaccagacaccgacgatcgatggcaaggccgagccgggtgtcgacgtggccgttaccttc
tcgacgggtgaggtgatccatgccaaggccgacgagaatggcgactggtcattggccccg
acccaggtgctgcccgcgggcaacaacgaaatctccctcattgccaccgatccggcgggc
aaccagagcgagacgacccttcttcccatcactatcgaaaccccggcctcgaccacgccg
aagggcggtgatgtgaccagcgacgtcgcccccaacgacagcgccccggtgatcgccgtt
agcgacgccgcgccgggcgacatcatccaccagatcggtggcgggaccgggcaggacagc
accccggtcgccagtgcagtagcagagggctacggcagcaacgccagcctgctggataca
ggctcgatgagcaccccggtcggggcctacgtcatccagtcgttctcctatgagtcgacc
ggcaacactgccggccgtatcgaggtcactggtgatcaggtctcctcgtacgtcaccagc
aatcctgcctcggtcacgccggcggcgggtggcgatgccctctcgatgcccacagagccc
cctgcatacgctgcccacgactcgactcacatcttcgctggttctggcctcgatacgctg
gaactggctggcgccaaccagggcccggatctgcgggggctatccgcagacaacggtcag
gtcaggatcgagaagcccgactttgccggcgacaaagcactcaccgtctccctcaacgac
gtgctgagtcagggggagagcgacctgttccagaagggtagcgagtccaaggtaacggtg
gacggcgatgccctgaatggccaccccgaccacggctcggctacctggcaggacacaggc
accaccacgctcggcagttcgatcttccaaggccacagccagctggacgccgaggccctg
atcaagcaggccgtcgccagcagcatcgtctaa
DBGET
integrated database retrieval system
