Pseudomonas sp. W03: SD196_05425
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Entry
SD196_05425 CDS
T11012
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00470
D-Amino acid metabolism
pswo00550
Peptidoglycan biosynthesis
pswo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD196_05425 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD196_05425 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pswo01011
]
SD196_05425 (murD)
Enzymes [BR:
pswo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SD196_05425 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pswo01011
]
Precursor biosynthesis
Amino acid ligase
SD196_05425 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
XOT23646
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Position
1156403..1157749
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AA seq
448 aa
AA seq
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MSLIASDQFRIVVGLGKSGMSLVRYLARQGVPFAVADTRENPPELATLREQYPQVEVRCG
DLDADFLCRAQELYVSPGLSLRVPALVEAAARGVRMSGDVDLFARNARAPIVAITGSNAK
STVTTLVGDMAKAAGKRVAVGGNLGTPALDLLADDVELYVVELSSFQLETCERLNAEVAT
CLNVSEDHMDRYDGMADYHLAKHRIFRGAKQVVVNRADALSRPLIADNVPCWTFGTNKPD
FKAFGLIEEDGEKWLAFQFDKLMPARELKIRGAHNQANALAALALGHAIGLPFEPMLQTL
REFAGLAHRCQWVRERNGVNYYDDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGAD
FQDLRGPVAQHCRAVVLLGRDAELVGAAIGNAVPKVRVNTLDEAVEHAADLALPGDAVLL
SPACASLDMFKNYEERGRLFAKAVEELA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgctacctggcgcgccagggtgtgccttttgccgtggccgacacgcgcgag
aatccgccggagctggcgaccctgcgcgagcagtatccgcaggtcgaggtgcgctgcggc
gacctcgacgccgatttcctctgccgcgcccaggagctctacgtgagccccggtctgtcg
ctgcgcgtcccggcgctggtggaagccgccgcccgtggcgtgcgcatgtccggcgacgtc
gacctgttcgcgcgtaacgccagggcgccgatcgtcgccattaccggttccaacgccaag
agcaccgtcaccaccctggtgggcgacatggccaaggcggccggcaagcgtgttgccgtc
ggcggcaacctcggcaccccggcactggatttgctggccgacgacgtcgagctgtacgtg
gtggagctgtccagcttccagctggaaacctgcgagcgcctgaacgccgaagtcgccacc
tgcctgaacgtcagcgaagaccacatggaccgctacgacggcatggccgactaccacctg
gccaagcaccgcatcttccgcggcgccaagcaggtcgtggtgaaccgtgctgacgcgctg
agccgcccgctgatcgccgacaacgtgccgtgctggaccttcggcaccaacaagccggac
ttcaaggcgttcggcctgatcgaagaagacggcgagaagtggctggccttccagttcgac
aagctgatgccggcccgtgaattgaaaatccgtggcgcgcacaaccaggccaatgccctg
gccgcgctggccctcggtcatgccattggcctgccgttcgagccgatgctgcagaccctg
cgcgagttcgccggcctggcccatcgctgccagtgggtacgtgagcgcaacggcgtgaac
tactacgacgattccaaggccaccaacgtcggcgccgccctggctgccatcgaaggcctg
ggggccgatatcgacggcaagctggtgctgatcgccggtggtgacggcaagggtgccgac
ttccaggacctgcgcggccccgtggcgcagcattgccgcgcggtggtgctgctggggcgc
gatgccgagctggtcggtgcggccatcggcaatgccgtgcccaaggtgcgcgtgaatacc
ctggacgaagccgtcgagcatgctgccgacctggcgctgccgggcgatgcggtgctgctg
tcgccggcctgcgccagcctggacatgttcaagaactacgaagaacgcggacgcctgttc
gccaaggccgtggaggagctcgcctga
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