Pseudomonas sp. W03: SD196_06255
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Entry
SD196_06255 CDS
T11012
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswo03009
]
SD196_06255
Enzymes [BR:
pswo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SD196_06255
Ribosome biogenesis [BR:
pswo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SD196_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3509
Motif
Other DBs
NCBI-ProteinID:
XOT23807
LinkDB
All DBs
Position
complement(1320044..1320739)
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AA seq
231 aa
AA seq
DB search
MRLDRFIANLPRFNRQQARQLLAEGRLRVDGQVVRDGQHEVREFSRVELDEELLQAGKPA
RYFMLHKPAGCVSATRDAEHRTVLDLLDEPDKHELHIGGRLDYNTTGLLLITNDGQWSRR
MTLPGRKLPKVYYVETEDPIEAHYAQTFEQGLYFAFEDLTTLPAQLEILAPRAARLTLHE
GRYHQVKRMFGHFQNKVTRLHRESMGSLRLDPALQPGQYRALTAQEIAELG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctggaccgtttcatcgccaacctgccccgcttcaaccgccagcaggcccgccaa
ctactcgccgaaggccgcttgcgcgtcgatggtcaggtggtgcgcgacggccaacatgaa
gtccgcgagttcagccgggtggagctggacgaggagctgctgcaagccggcaagcccgct
cgctacttcatgctgcacaagcccgccggctgcgtcagcgccacccgcgacgccgagcac
cgcaccgtgctcgacctgctggacgagccggacaagcacgaactgcacatcggcggccgc
ctggactacaacaccaccggcctgctgctgatcaccaacgacggccagtggtcccggcgc
atgaccctgccgggacgcaagctgcccaaggtctattacgtcgagactgaagaccccatc
gaagcgcactacgctcagaccttcgagcaagggctgtacttcgccttcgaagacctcacc
accctgcccgcccaactggaaatcctcgccccgcgcgcggcacgcctgaccttgcacgaa
ggccgctaccaccaggtcaagcgcatgttcggccacttccagaacaaggtgacccgcctg
caccgcgagagcatgggcagcctcagactcgatccggcactgcagcccggtcagtaccgc
gcgctgacggcgcaggagattgccgagctggggtga
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