Pseudomonas sp. W03: SD196_08440
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Entry
SD196_08440 CDS
T11012
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswo03032
]
SD196_08440 (gyrA)
03400 DNA repair and recombination proteins [BR:
pswo03400
]
SD196_08440 (gyrA)
Enzymes [BR:
pswo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SD196_08440 (gyrA)
DNA replication proteins [BR:
pswo03032
]
Prokaryotic type
DNA Topoisomerases
SD196_08440 (gyrA)
DNA repair and recombination proteins [BR:
pswo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SD196_08440 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XOT24218
LinkDB
All DBs
Position
1760288..1763062
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AA seq
924 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLALMDNPELSIDDLMNYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARATIEDMEKGGNRQQIIITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTMNLKEMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKTSPTPAEAKERLIATAWESSA
VEAMVERAGADSCRPEDLDPQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQ
EILTLIGELIRILTSPERLMEVIREELEKVKAEFGDARRTEIVASQMDLTIADLITEEER
VVTISHGGYAKSQPLAAYEAQRRGGKGKSASGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEAVRAQFAGEDGDDDDVVAE
QVAEVVEAEEGEEGDDADFSQDEPTGAYIFMATMKGTVKKTPLIQFTKPRSNGLIALKLE
EGDSLIAAAITDGSKDVMMFSNAGKVIRFKESKVRIMGRNARGVRGMRLAEDQRIISMLI
PECREAQILTASERGYGKRTPLADYPRRGRGGQGVIAMVINERNGNLVGAVQVLDGEEIM
LISDQGTLVRTRVDEVRGAGRNTQGVILIKLAADETVVGLERVQEPTVVEDDVIDGEIVE
GEVADENQEAGEAAAEEAPQASED
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaacatcgaagacgaactccgacagtcc
tacctcgattacgccatgagcgtgatcgtcggtcgtgccctgcccgatgcgcgcgacggc
ttgaagcccgtgcatcgccgcgtcctgtacgccatgagcgaactgggcaacgactggaac
aagccctacaagaaatccgcccgtgtggtcggcgacgtgatcggtaagtaccacccgcac
ggcgacaccgcggtgtacgacaccatcgtccgcatggcccagcccttctcgctgcgctac
atgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatggccaagctcgcccatgagctgctggcggacctggacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcaccgaggtgatcgacggctgcctggcgctgatggacaac
cccgagctgtccatcgacgacctgatgaactacatccccggtccggacttcccgaccgcg
ggcatcatcaacggtcgtgcgggcatcatcgaggcctatcgcaccggtcgtggccgcatc
tatatccgtgcccgcgccaccatcgaggacatggagaagggcggcaaccgccagcagatc
atcatcaccgagctgccctaccagctgaacaaggcccgcctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgtgtggtcatcgagttgcgccgcggcgaagtgggcgaggtcgtgctgaacaac
ctctacgcccagacccagctgcagagcgtttttggcatcaacgtggtggccctggtcgac
ggccagccgcgcacgatgaacctcaaggaaatgctcgaggtcttcatccgccaccgccgt
gaagtggtgacccgccggaccgtctatgagctgcgcaaggcccgcgaacgcggccacatc
ctggaaggtcaggccgtcgccctgtcgaacatcgacccggtgatcgagctgatcaagacc
tcgccgaccccggccgaagccaaggaacgcctgatcgcgaccgcctgggaatccagcgcc
gtagaggccatggtcgagcgcgccggcgccgactcctgccgtccggaagacctggacccg
cagtacggcctgcgcgacggcaagtactacctgtcgccggagcaggcccaggccatcctg
gaactgcgcctgcatcgcctgaccggcctggagcacgagaagctcctgtccgagtaccag
gaaatcctcaccctgatcggtgaattgatccgcatcctgaccagccccgagcgcctgatg
gaagtcattcgcgaagagctggagaaggtgaaagcggagttcggcgacgcccgccgcacc
gagatcgtcgcgtcgcagatggacctgaccatcgccgacctgatcaccgaagaagagcgc
gtggtgaccatctcccacggcggctacgccaagtcccagccgctggccgcctacgaggcc
cagcgtcgcggtggcaagggcaagtccgccagcggcgtgaaggacgaggactacatcgag
cacctgctggtcgccaacagccacgccaccctgctgctgttctccagcaagggcaaggtc
tactggctgcgcaccttcgagatcccggaagcctcccgtaccgcccgtggccgtccgctg
gtgaacctgctgccgctggacgaaggcgagcgcatcaccgcgatgctgcagatcgacctg
gaagccgtgcgcgcccagttcgccggtgaagacggcgatgatgacgacgtggtcgctgag
caggtcgccgaagtggtggaagccgaagagggcgaagagggcgacgacgccgacttcagc
caggacgagccgaccggcgcgtacatcttcatggccaccatgaaaggcaccgtgaagaag
accccgctgatccagttcaccaagccgcgctccaacggcctgatcgccctgaagctggaa
gagggcgactcgctgatcgccgctgccatcaccgacggttcgaaggacgtgatgatgttc
tccaacgccggcaaggtgatccgcttcaaggaaagcaaggtgcgcatcatgggccgtaac
gcccgtggcgtgcgtggcatgcgcctggccgaagaccagcgcatcatctccatgctgatt
ccggaatgccgcgaggcgcagatcctcaccgcttccgagcgtggctacggcaagcgcacc
ccgctggccgactacccgcgtcgcggtcgtggtggccagggcgtgatcgccatggtgatc
aacgagcgtaacggcaacctggtcggcgccgtgcaggtgctggatggcgaggaaatcatg
ctgatttccgaccagggcaccctggtgcgtacccgcgtcgacgaagttcgcggtgcgggc
cgtaacacccagggcgtgatcctcatcaagctcgccgccgacgagaccgtcgtgggcctg
gagcgggtgcaggagcctaccgtcgtggaagacgacgtcatcgacggcgagatcgtcgaa
ggcgaagtagcggacgagaaccaagaagcaggcgaagctgcggctgaagaagccccgcag
gccagcgaagactga
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