Pseudomonas sp. W03: SD196_08970
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Entry
SD196_08970 CDS
T11012
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
pswo02025
Biofilm formation - Pseudomonas aeruginosa
pswo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_08970 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
SD196_08970 (fliA)
09142 Cell motility
02040 Flagellar assembly
SD196_08970 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswo03021
]
SD196_08970 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pswo02035
]
SD196_08970 (fliA)
Transcription machinery [BR:
pswo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SD196_08970 (fliA)
Bacterial motility proteins [BR:
pswo02035
]
Flagellar system
Flagellar assembly proteins
Stator
SD196_08970 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
HTH_AsnC-type
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
XOT24313
LinkDB
All DBs
Position
1879279..1880028
Genome browser
AA seq
249 aa
AA seq
DB search
MMTASGARMYSKAQAQNSQDQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLE
AAKKYDAGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRTVEARTGRD
AKDQEVAAELNMSLEEYYGILSDTQGSRLYSFDDLLQDGEQGSGLAEDASHQGNEPSHGL
EDERFQAALADAITKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLR
ARLAEWRAH
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggcctccggagcgcgtatgtacagcaaggcgcaggcgcagaactcccaggac
caactgatccagcggtacgcgccgctggtcaaacgtatcgcctaccacctgctgggccgc
ctgccggccagcgtgcaggtggaggatttgatgcaggccggcatgatcggcctgctggaa
gcggcgaagaaatacgatgccggcaagggcgcgagcttcgagacctacgccggcatccgc
atccgcggcgccatgctcgacgaggtgcgcaagggcgattgggccccgcgttcggtgcac
cgcaatacccgcatggtcagcgacgcgatccgcaccgtcgaggccagaaccggtcgtgac
gctaaagatcaggaagtcgctgccgaactcaatatgagtctcgaagagtattacggcatt
ctcagcgacacccagggcagccgcttgtacagcttcgacgatctgctgcaggacggcgag
cagggcagtggcctggccgaagacgcttcgcaccagggcaacgagccctcccacggcctg
gaagacgaacgcttccaggcggcgctggccgacgccatcaccaagctgcccgagcgtgag
cggctggtgctggccctgtactacgacgaggaactcaacctcaaggagatcggcgaagtg
ctgggggtcagcgagtcccgggtcagccagctgcacagccaatgcgccgcgcgcctgcgg
gcacgtctggcggagtggcgcgcgcactga
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integrated database retrieval system
