Pseudomonas sp. W03: SD196_09375
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Entry
SD196_09375 CDS
T11012
Name
(GenBank) efflux RND transporter permease subunit
KO
K21134
multidrug efflux pump
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_09375
Transporters [BR:
pswo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SD196_09375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
XOT24392
LinkDB
All DBs
Position
complement(1953685..1956774)
Genome browser
AA seq
1029 aa
AA seq
DB search
MSRNSTLSEQKRGFNLSAWSIGQKPLMFFLMLITLVGGAISYTQLSRNEDPAFTIKTMVV
SARWPGATIDDTTKLLTDRLEKKLEETPYLDRLDSYTRPGETVIMVNLRDDAPSRVVPET
WYQVRKKMADIASTLPSGRQGPFFDDEFGDTYGQIFGFTAEGFSDRELRDYLEGVRAELL
RIPGIGKVQLLGVQEEQIVVEFSAGRLAAFGLDEEAVLRALKAQNAVIPSGTVRLPDDKI
ALRVSGGFASEESIRNVTLRANDRFVPLTELATIRRIPADPPAPLFRVNGEKALGLAISM
DAGGNLLEFGEAVRSRMDEVRTALPHGIEMLQVADQSTVVKQAVSGFLTVLAEAVAIVLA
VSFLSLGVRAGLVVSISIPFVLALTFIGMELTGIGLQRISLGALIIALGLLVDDAMITVE
AMVGKLEEGWNLKRAASFAYESTAFPMLTGTLVMIAGFIPVGFAASSAGEYCYSMFMVVL
ISLSASWVVAVLFSPLLGTLLLPKALPHHGHGNGPIMGTYERALSWVLGHRALTLMLAGA
AFLVSLGAATHLEQQFFPPSDRPELLVSLTLPQNASLEATEREAAKLEKLLKDDPNVERF
STYVGSGAIRFYLPMEVLLQNENVTQTVVIAKGVKERDALQAKLAEIFKTDFAGLIARAT
PLELGPPVGWPLKYRVTGPDQGKVHDIAARLANVLSANPDTREIHLLSGEPQRSVLVQID
QTQARALGLSSEDVASAMATVFSGSAVTTVRDQDRLVDVIVRAQTGERTNLATLANLQIR
TAQGHTIPLTQIAKLSYGVEEPIIWRRQRLPLITVQGDIREGLEAATVVQALAPAVAQFS
SELPKGYKVETGGVVEEAAKGSASVLAVLPITALVMCVLLMVQLRSFSRMFLALAMAPFG
LIGVVLAMLPTGTPMGFVAQLGVIALVGMIVRNAIILIEEVDINIHAGQSPREAIAHASM
HRARPIVLTACAAILGMIPIAPQIFWGPMAYAVIGGLAVATIVTLTVLPSALSLLLQWEQ
RSRQGSAPD
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaattcgacactgtcggagcaaaagcgcggcttcaatctctcggcctggtcc
attggccagaaaccgttgatgttcttcctcatgctgatcacgctggtcggcggagcgatc
agctatacacagctgagccgcaacgaagatccggcattcaccatcaagaccatggtggtc
tcggcccgctggcctggcgcaaccattgacgatacgacgaagcttctgactgaccgcctc
gagaaaaagctcgaggagaccccctatcttgaccggctcgatagctacacgcgtcctggc
gaaaccgtcatcatggtcaacctgcgcgatgacgcaccgtcgcgagttgtccccgaaacc
tggtaccaggttcgtaagaaaatggccgatatcgcctcgacgctcccaagcggcagacaa
ggccccttcttcgatgatgagttcggcgacacctacggacagatatttgggtttacggcc
gagggcttctctgaccgtgaactgcgcgattacctcgaaggtgtgcgtgccgagctactg
cgcatccctggtatcggtaaggtgcaactcctgggcgttcaggaggagcagatagtcgtc
gagttctcggctggccggctggccgccttcggacttgacgaagaagcggtactgcgtgct
ctgaaagcacagaatgcggtcatcccatccggaacggtgcgactgcccgacgataagatc
gcattgcgcgtgagtggcggcttcgcatccgaggagagcatccggaatgtgaccttgcga
gccaacgaccgcttcgtgccactcaccgagctcgccaccatccggcgaattccagctgac
ccaccggcgccgctgttccgcgtcaacggcgaaaaggcactcggccttgctatctccatg
gatgccggcggtaacctgctcgaattcggggaagcggtacgcagtcgcatggatgaggtc
aggacggcgctcccgcacggtattgaaatgctacaggtagccgaccagtcgactgtcgtg
aagcaggcggtcagcggtttcttgacggtcctggccgaagcggtcgcgatcgtgcttgcg
gtgtcattcctctcgctcggtgtccgggccggcctcgtggtcagtatctcgatccccttt
gttctggcactgactttcatcggcatggagctgaccggcataggcctccaacgcatatcc
ctgggcgcactaatcatcgctctcggcctgctcgtcgacgacgcgatgatcaccgtcgag
gccatggtcggtaagctggaagaaggctggaacctgaaacgggcagcgagcttcgcttac
gagtcgaccgccttcccgatgctgacaggcacgctcgtcatgatcgcggggttcatccct
gtcggcttcgcggcatcgagcgcaggtgagtattgctattcgatgttcatggtagtgctg
atatcgttgtcggcttcctgggtagtcgctgtcctgttttcgcccttgctcggcaccttg
cttctgcccaaggcactgccgcatcacggccatggcaatggcccaatcatgggcacctat
gaacgggcgctgtcctgggtcctcgggcatcgtgcgctgactctcatgctcgcaggtgcg
gccttcctggtgtcgcttggagctgccacccatctcgaacagcaatttttcccgccctct
gaccgccccgagctgctggtcagcctgacgttaccgcagaacgcatcgctggaagcgacg
gagcgcgaggcggcaaaactcgaaaagctgctcaaggacgaccccaacgtcgaacgcttc
tccacctatgttggctccggcgcaattcgcttctacttgcccatggaggtcttgctccag
aacgaaaacgtcacccaaacggtcgtgatagcgaagggtgtaaaggagcgtgacgcgctg
caagccaagcttgccgagatattcaaaaccgacttcgcagggcttatcgctcgagcgacg
ccgctcgaactgggtcctccggtcggctggccgctcaagtaccgcgtcacgggccccgat
cagggaaaggttcacgacattgctgcgcgccttgccaacgtgctctccgccaacccggac
acgcgtgagatacatctcctatcaggggagccgcaaaggagtgtcctcgtccaaatcgac
cagactcaggcgcgggcgctgggcctttcgtccgaagatgttgctagcgctatggcgacc
gtcttctccggctcggcggtgacgactgtgcgtgaccaggacagactcgtcgatgtgatc
gttcgggcgcagaccggtgagcgcaccaaccttgcgactctcgcgaatctccagatccga
acagcccagggccatacgatccccttgacccagatcgccaagctcagttacggcgtcgaa
gaaccgatcatctggcggcgtcagcgtctccctctgatcaccgtccaaggtgatattcgt
gaaggactggaagctgcgacggtggtgcaggctcttgcacctgcagtagcgcaattctct
tcggagctgcccaaagggtacaaagtcgaaacaggtggcgtggtcgaggaggccgccaag
ggaagcgcgtcggtcctcgccgttctgccgattacagcgctggtgatgtgcgtgctcctg
atggtgcaactgcgtagcttttcccgcatgttcctggcgctcgcaatggctccattcggc
ctcatcggcgtcgtactggccatgttgcctaccgggacgcccatgggctttgtcgcgcag
ctcggcgtaattgccttagttggcatgatcgtgcgcaacgcaatcattctgatcgaggag
gtggacatcaatatccacgcggggcaatcgccacgtgaagccatcgcgcatgcctcaatg
cacagggcccgcccgatcgtgctgactgcatgtgcggccatcctcggcatgatcccaatt
gcaccgcagatattttggggaccaatggcttatgcggtcattggagggcttgcagtcgcg
accatcgtgacactcaccgttcttccaagcgccctctccctcctgttgcaatgggagcag
cgtagtcggcaagggtctgcacctgactga
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integrated database retrieval system
