Pseudomonas sp. W03: SD196_10150
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Entry
SD196_10150 CDS
T11012
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_10150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_10150
Transporters [BR:
pswo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SD196_10150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XOT24531
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All DBs
Position
2135426..2138536
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AA seq
1036 aa
AA seq
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MNLSRPFILRPVATSLLTLALMLAGILSFGLLPVAPLPNVDFPTILVQAAMPGASPETMA
STVATPLERALGRIAGVTDMTSSSSLGNTTIIVQFDLSKDIDGAAREVQSAINAAASLLP
TGMPNNPTYRKANPSDMPIMILTLTSDTYTRGQMYDLASTIVSPKLAQVKGVGQVSIGGS
SLPAVRVDVNPDQLSQYGISLDSVRTAIDNTNADGPKGALEFGERHWQVDSNDQLRKASE
YAPLIVHYNAETGAAVRLKDVAKVSDSVEDVRNAGFSDNLPAVLLIITRQPGANIIEATD
AIHEQLPVIQDVLGPQVKLSVMDDRSPSIRSSLDEAELTLIISVMLVILVVYLFLRNGRA
TLIPSLAVPVSLVGTFAVMYLCGFSLNNLSLMALIIATGFVVDDAIVVVENIARRIEEGD
PPLKAAIRGAREVSFTVLSMTLSLVAVFIPLLLMGGITGRLFREFSVTLAAAILVSLVVS
LTLTPMLCARLLKPIERPQKASVARQSNRYFVAFMLRYRASLSWALEHSRLMVVIMLGCI
ALNVYLFVVVPKGFLPQQDSGRLRGFAVADQSISFQALDQKMAEFRKILSADPGVENVVG
FVGGGKWQSSNTGSFFVTLKDIGERDSAEVIVNRLRKQLAKIPGATLYLQAGQDVRIGGR
QSNAQYEFTLRSDDLALLREWGPKVEAVLNKVPQLVDVNSDAQDKGVQSRLVIDRDRAAS
LGVNVAEVDAVLNNSYGQRQVSTIFNPLNQYHVVMEVDQPYQESPEELRQVYVIGSDGQR
VPLSAFAHVEPSRAPLTVNHQGQFAATTFSFNLAPGALIGPARDAVMAALEPLHLPIDIQ
ATFEGNAGAVQDTQNNMPWLILLALVSVYIVLGILYESYVHPLTILSTLPSAGVGALLTL
MLFRTELSLIALIGVILLIGIVKKNAIMMIDFALDAERTLGLSPRDAILEACMKRFRPIM
MTTLAAILGALPLIFGVGGDAALRRPLGMTIVGGLIGSQLLTLYTTPVVYLYLDRLRHWV
NKKRGVRTDGALETPV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtcgcgcccgttcatcctgcgcccggtcgccaccagcctgctgaccctggcg
ctgatgctggccggcatcctgtccttcggcctgctgccggtggcgccgctgcccaacgtg
gatttccccaccatcctggtgcaggcggcgatgcccggcgccagtccggaaaccatggcc
tccaccgtggcaacgccgctggaacgcgcgctcggacgcatcgccggggtcaccgacatg
acctccagcagctccctgggcaacaccaccatcatcgtgcagttcgacctgtccaaggac
atcgacggcgccgcgcgcgaggtgcagtcggcgatcaacgcggcggcgagccttttgccc
accggcatgccgaacaacccgacgtaccgcaaggcgaacccgtcggacatgccgatcatg
attctcaccctgacctcggatacctacacccgtgggcagatgtacgacctcgcctcgacc
atcgtgtcgcccaagctggcgcaggtgaagggcgtggggcaggtgagcattggcggctcc
tcgctgccggcggtgcgggtcgacgtcaacccggaccagctcagccagtacggcatttcc
ctggacagcgtgcgcaccgccatcgacaacaccaatgccgacgggccgaaaggcgcgctg
gaattcggcgagcggcactggcaggtggactccaacgaccagctgcgcaaggccagcgaa
tatgcaccgctgatcgtccactacaacgccgagaccggcgcggcggtgcgcctgaaggac
gtggcgaaggtgtccgactcggtggaggacgtgcgcaacgccggcttctcagacaacctg
ccggcggtgctgctgatcatcacccgccagccgggcgccaacatcatcgaggccaccgac
gccatccacgagcagttgccggtgatccaggacgtgctcggcccgcaggtgaagctgtcg
gtgatggatgaccgcagcccgtcgatccgctcctcactggatgaggctgaactgaccctg
atcatctcggtgatgctggtgatcctggtggtctacctgttcctgcgcaacggccgcgcc
acgctgatccccagcctcgcggtgccggtatcgctggtgggcaccttcgcggtcatgtac
ctgtgcggcttctcgctgaacaacctgtcgctgatggcgctgatcattgccaccggcttc
gtggtggacgacgccatcgtcgtggtagagaacatcgcccggcgcatcgaggagggcgac
ccgccgctcaaggcagccattcgcggtgcgcgcgaggtgagcttcaccgtgctgtcgatg
accctgtcgctggtggcggtgtttatcccgctgctgctgatgggcggcatcaccgggcgg
ctgttccgcgagttctcggtgaccctggcagcggcgatcctggtgtcgctggtggtgtcc
ctgaccctcacgccgatgctctgcgcgcggctgctcaagcccatcgaacgaccgcagaag
gcctcggtggcacgccagagcaaccgttacttcgtcgccttcatgctgcgctatcgcgcc
agcctcagctgggcgctggagcattcgcggctgatggtggtgatcatgctcggctgcatc
gcgctgaacgtttacctgttcgtggtggtgcccaagggtttcctgccgcagcaggactcc
ggacggctgcgtggctttgcagtggccgaccagagcatctcgttccaggcgctggaccag
aagatggccgagttccgcaagattctctccgccgatccgggggtggagaacgtggtgggc
ttcgtcggcggcggcaagtggcagtcgagcaacaccggctccttcttcgtcaccctgaag
gacatcggcgagcgcgactcggcggaggtcatcgtcaaccgcctgcgcaagcagctggcg
aagattcccggcgccacgctctacctgcaggccggccaggacgtgcgcatcggcggccgg
cagagcaacgcccagtacgaattcaccctgcgcagcgacgacctggccctgctgcgcgag
tgggggcccaaggtcgaggcggtgctgaacaaggtgccgcagttggtggacgtcaacagc
gacgcccaggacaagggcgtgcagagccgcctggtgatcgaccgcgaccgtgccgccagc
ctcggggtcaacgtcgccgaggtggatgcggtgctgaacaactcctacggccagcgccag
gtttcgaccatcttcaacccgctgaaccagtaccacgtggtgatggaggtggatcagccc
tatcaggagtcgcccgaggagcttcgccaggtctacgtgatcggcagcgatggccagcgc
gtgccgctgtcggccttcgctcatgtggagccgagccgcgcgccgctgacggtcaaccac
cagggacagttcgccgcgaccaccttctccttcaacctggcacccggcgcgctgatcggc
ccggcccgcgacgcggtgatggcggcgctggagccgctgcacctgcccatcgacatccag
gccaccttcgaaggcaacgccggcgcggtgcaggacacccagaacaacatgccctggctg
atcctgctggcgctggtgtcggtgtacatcgtgctcggcatcctctacgagagctacgtg
cacccgctgaccatcctctcgacgctgccttccgccggcgtcggcgcgctgctcacgctg
atgctgttccgcaccgagctgtcgctgatcgcgctgatcggggtaatcctgctgatcggc
atcgtgaagaagaacgcgatcatgatgatcgacttcgccctcgacgccgaacgtactctc
gggctgtcgccgcgcgacgcgatcctggaagcctgcatgaagcgcttccggccgatcatg
atgaccaccctggccgccatcctgggcgcgctgccgctgatcttcggcgtcggcggcgat
gccgcgctgcgccgcccgttgggcatgaccatcgtcggcggcctgatcggcagccagttg
ctgaccctgtacaccacccccgtcgtctacctctacctcgaccgtctgcgccattgggtc
aacaagaagcgcggcgtgcgtaccgacggcgccctggagacacccgtatga
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