Pseudomonas sp. W03: SD196_12950
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Entry
SD196_12950 CDS
T11012
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo01501
beta-Lactam resistance
pswo02020
Two-component system
Module
pswo_M00745
Imipenem resistance, repression of porin OprD
Brite
Transporters [BR:
pswo02000
]
Other transporters
Pores ion channels [TC:
1
]
SD196_12950
Antimicrobial resistance genes [BR:
pswo01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
SD196_12950
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOT25363
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Position
2771791..2773098
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AA seq
435 aa
AA seq
DB search
MLGALVAGIPFQLAHAAAVSDQSEATGFIEGSSANLLLRNYYYNSDRKSGARDRRDWTQG
FTLNYSSGFTQGTVGFGVEAFGNWGIRLDGGAGTSGTGNLPVRDDGSPESEYGRAGGALK
LRVSKTELRWGDLQPQAPVFAAGGSRLFPQTATGFNLLSSEIDGLDLDGGHFTGGNGPVT
TNGDHGIWASYANVEASSIDYVGGKYAVNESLSLSLYASQLEDVWRQYYGNANYTLPLAD
QQSLNFDFNIYRTNDDGSAKAGEISNTTWSFATAYNFLTAHTVTLAYQKVHGDTPFDYVA
FGLNGPGDTADSIFLANSIQYSDFNGPEEKSWQARYDLNMSSYGVPGLSFMARYVNGHGI
DGSKMAADSQYRGYNYGEDGKHHETNLEAKYVVQSGPAKDLSLRLREAIHRGNADQAEGD
VNEFRLIVDYPISIL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcgcattggtcgccggcattccgttccagttggcccatgcggccgccgtttcc
gaccagtccgaggccaccggcttcatcgagggcagcagcgcgaacctgctgttgcgcaac
tactactacaacagcgaccgcaagtccggcgcccgcgaccgccgcgactggacccagggc
ttcaccctcaactacagctccggcttcacccagggcacggtgggcttcggcgtcgaggcg
ttcggcaactggggtatccgcctggatggcggggcgggcacctccggcaccggcaacctg
ccggtgcgcgacgacggctcccccgaaagcgaatacggccgcgccggaggcgcgctgaaa
ctgcgggtgtcgaagaccgaactgcgctggggcgacctgcaaccccaggcgccggtgttt
gccgctggcggcagccgcctgttcccgcagacggcgaccggtttcaacctgctcagcagc
gagatcgacgggctggacctggacggtggccacttcaccggcggcaacggaccggtcact
accaatggcgaccacggtatctgggcctcctacgccaacgtcgaggccagcagcatcgac
tacgtcggtggcaaatacgcggtcaacgaaagcctgagcctgtcgctctacgcctcccag
ttggaagacgtgtggcgccagtactacggcaacgccaactacacgctgccgctggccgat
cagcagtcgctgaacttcgacttcaatatctaccgcaccaacgacgacggcagcgccaag
gccggcgagatcagcaacaccacctggtcgttcgccactgcctacaacttcctcaccgcg
cacaccgtcaccctggcctaccagaaggtccacggcgacacgccgttcgactacgtcgcc
ttcggcctcaatgggcctggcgataccgccgactcgatcttcctcgccaactcgatccag
tactcggacttcaacggcccggaagagaaatcctggcaggcgcgctacgacctcaacatg
agcagctacggcgtacccggcctgagcttcatggcgcgctacgtcaacggccatggcatc
gacggctcgaagatggcagccgacagccaataccgtggctacaactacggcgaggacggc
aagcaccacgagaccaacctggaagccaagtacgtggtgcaatccgggccggccaaggac
ctgtcgctgcgcctgcgcgaggcgatccaccggggcaacgccgaccaggccgagggtgac
gtcaacgagttccggctgatcgtcgactacccgatctcgattctctga
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