Pseudomonas sp. W03: SD196_13210
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Entry
SD196_13210 CDS
T11012
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00260
Glycine, serine and threonine metabolism
pswo00460
Cyanoamino acid metabolism
pswo00630
Glyoxylate and dicarboxylate metabolism
pswo00670
One carbon pool by folate
pswo00680
Methane metabolism
pswo01100
Metabolic pathways
pswo01110
Biosynthesis of secondary metabolites
pswo01120
Microbial metabolism in diverse environments
pswo01200
Carbon metabolism
pswo01230
Biosynthesis of amino acids
pswo01240
Biosynthesis of cofactors
pswo04981
Folate transport and metabolism
Module
pswo_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SD196_13210 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SD196_13210 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SD196_13210 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SD196_13210 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SD196_13210 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SD196_13210 (glyA)
Enzymes [BR:
pswo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SD196_13210 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XOT25112
LinkDB
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Position
complement(2832605..2833858)
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AA seq
417 aa
AA seq
DB search
MFSKHDQIQGYDDELLAAMDAEEARQEDHLELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANAAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAIQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIKNAQAMAS
VFIDRGYDVVSGGTDNHLMLISLVKQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTS
GIRIGTPAVTTRGLQEQQCRELAGWICDVLDHLGDADVEAKVAGQVAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccagatccagggctatgacgacgaactgctcgcggcgatggac
gccgaggaggctcgccaggaggaccacctcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccagggcagcgggctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtcgacaaggtcgagcagctggccatcgac
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggctcctcg
gccaacgccgctgtttatctcgccctgctcaacgccggcgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtctcctcctccggcaagctgtac
aacgccatccagtacggcctggacaccgccaccggcctgatcgactacgacgaagtcgag
cgcctggccgtggagcacaagccgaagatgatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgcttccgcgccatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgccgccggcctgtaccccaacccgctgccctac
gccgacgtggtcaccaccaccacccacaagacccttcgcggtccgcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaagaagctcaactccgccgtcttccctggcgcc
cagggtggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagcgctg
gaacccggcttcaaggactaccaggcccaggtgatcaagaacgcccaggccatggcctcg
gtgttcatcgaccgcggctacgacgtggtctccggcggcaccgacaaccacctgatgctg
atcagcctggtgaaacagggcctgaccggcaaggaagcggacgccgccctgggccgcgtc
ggcatcaccgtgaacaagaacgccgtgccgaatgacccgcagagcccgttcgtcacctcc
ggtatccgcatcggcaccccggcggtcaccacccgtggcctgcaggaacagcagtgccgc
gaactggccggctggatctgcgacgtactggaccacctgggcgacgccgacgtcgaggcc
aaggtggccggccaggtcgctggtctgtgcgccgactatccggtttaccgctga
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