Pseudomonas sp. W03: SD196_15340
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Entry
SD196_15340 CDS
T11012
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswo03000
]
SD196_15340
Transcription factors [BR:
pswo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SD196_15340
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
XOT20320
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Position
complement(3349857..3350900)
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AA seq
347 aa
AA seq
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MTAQNKDKKNDRSSRTTGRPTLDEVARRAGVSPITASRALRGVSTVAEELAQKVRQAASE
LGYVANPAARALASKQSPNVVVLVPSLANQLFIETLEAIHAVMHPRGLEVLIGNYHYSRD
EEENLLRNYLAYQPRGLLLTGFDRTESARRMIEASGVPAVYMMDLDPGAGLHCVGFSQIR
AGEAAAKHLLKSGRKRLAYIGAQLDQRTLLRGEGYRRALQQAGVYDPALEVLTPRPSSVG
LGGELFRQLLASQPQVEGIFFGNDDLAQGALLEAMRHGIRIPEQVAVLGFNDLPSSEFMV
PRLSSIRTPRKAIGTHAAERLLDLINDKPVSAPVMDLGFELMVRESS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcagaacaaagacaagaagaacgacagaagctcccgcaccaccggcagaccc
accctcgacgaggttgcgcgccgcgcgggcgtcagccccatcaccgcctcgcgcgccctg
cgcggagtgagcacggtggccgaggaactggcgcagaaggtccgacaggcggccagcgaa
ctgggctacgtggccaaccccgccgcccgcgcgctggcctccaagcagagccccaacgtc
gtggtgctggtgccgtcgctggccaaccagttgttcatcgaaacgctcgaagccatccat
gccgtgatgcatccgcgcggcctggaagtgctgatcggcaactatcactactcccgcgac
gaagaagagaacctgctgcgcaactacctcgcgtaccagccgcgcggcctgctgctgacc
ggcttcgaccgcaccgagagcgcgcggcggatgatcgaggccagcggtgtgccggcggtc
tacatgatggacctggaccccggcgccggcctgcattgcgtgggcttctcgcagattcgc
gcgggggaggcggcggccaagcacctgctcaagagtgggcgcaagcggctggcctacatt
ggcgcgcagttggaccagcgcacgctgctgcggggcgaggggtaccgtcgcgcgctgcag
caggcgggcgtctatgacccggcgctggaggtgctgacgccgcgtccgtcctcggttggc
ctgggcggcgagctgttccgccagttgctggccagccagccgcaggtggaaggcatcttc
ttcggtaacgacgacctggcccagggtgcgttgctggaggccatgcgccatgggattcgc
atccccgaacaagtggcggtgctgggcttcaacgacctgcccagttcggaattcatggtg
ccgcgcctgtcgagcatccgcacgccgcgcaaggccatcggaacgcatgcggcggagcgc
ctgctggacctgatcaacgacaagccggtgagcgcgccggtgatggacctggggttcgag
ctgatggtgcgcgaaagcagctga
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