Pseudomonas sp. W03: SD196_15775
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Entry
SD196_15775 CDS
T11012
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_15775
Transporters [BR:
pswo02000
]
Other transporters
Pores ion channels [TC:
1
]
SD196_15775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
XOT20405
LinkDB
All DBs
Position
complement(3448643..3452308)
Genome browser
AA seq
1221 aa
AA seq
DB search
MRTMRWLLGGLLGLILLSIAGLSALLGTEAGSRMALQRVPGLTLDGFSGRLAGAFTARRL
EWSDGATRLVLDEPDIDWSPGCLLRMALCLSRVAAKEIRLTLPPSESSESSGPIQLPSLN
LPLALELGDVRIGRFLLDDQEQLRDTNLVANWDPEGLHIQSATLARGDLRLSLSGLLKPT
QGWPLQAQGSLDLPAVGGKPWSLKLQVDGELQGHLKLQAQSSGYLNGQLQGDVQPLAENL
PAQALVLADGFKADAALPDTLTLNQVRLNANGDLKNGYQIAGAALLPAEDSPVVLTLRGR
VDAQGADIAALDLTAAQVQRLGVQGRLDWKEGFAADATLDWLDFPWRRLYPAIEEPPVSV
HSLKAEVQYRDGAYLGNFDAALNGPAGAFTLASPVSGNLSEVFLPSLQLVAGQGKAEGHV
KVGFADTVSWDADLDLRDLDPAYWLEQMPGRLGGPLRSQGSLKGGSLNLTANLDLQGRLR
GQPALLRARAEGAGQSWKADELTLQLGDNRITGQAALDQHLSGKLDLALNQLGQLWPQLA
GQLGGRLDLAGTLQAPQGQLALNGQRVAYAGQSLRSLALDAKLDAAQRGRLDLQVQGLRS
GDTRLGTLKLEGSGDKQRQQLSLNLQGKPVVLALNLDGTWNGRDWRGRLAQGDIQSGGQD
WRLQQPAKLERLADGRLTLGAHCWASGPASLCAEDQRLMPDPRLRLHLRQFPLDSLARWL
PEDFAWRGQLDGDVQLDLPASGPNGSILLNAGSGTLRLKEQDDWVDFPYQSLQLESRLTP
RRIDTSLQFHGEKLGTLDAQVQLDPRPKSKPLSGSFSLNGLDLSIARPFVPAVETLKGRL
HGNGRISGGLLAPRVDGELRLVDGEISGGDLPTRLEQLQVQARIAGEQVDLSGHWTAGEH
GNGNLSGRIAWNEALDVDLNVRGNRLPVTIDPYAELEVAPDLAIRMAGEGLAVSGKVQVP
SGAITIRQLPPSTVKVSDDTVIVGQKQEQKAAAALHMDVDVIVGEDKLTFSGFGLNAELA
GQVHVGDNLDTRGELRLNKGRYRAYGQKLTIRRARLLFAGPIDQPYLDIEAIRKVDDVIA
GLRLTGNAEQPRSEVFSEPAMSQQQALSYLVLGRPMSTGEDSNMMGEAALALGLAGSAPL
TGEVAQKLGIQDFQLDTEGTGNSTSVVASGQLSDKLSLRYGVGVFEPANTIALRYLLSKK
VYLEAASGLASSLDIFYKRDF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatgcgctggctgctgggcgggctgctcggcctgatcctgctatcgatagcg
ggcctgtcggcattgctgggcaccgaagcgggtagccgaatggcgttgcagcgggtgccg
ggtttgaccttggatggcttcagcggccgcctggccggcgccttcaccgcgaggcgcctg
gagtggagcgacggcgccacccgcctggtgctcgacgagccggatatcgactggtcgccg
ggctgcctgctgcgcatggcgctgtgcctgagccgcgtggcggcgaaggagatacggctg
accctgccgccaagcgagtcgagcgagtcttccgggccgatccagttgccgagcctgaac
ctgccgctggccctggagctgggcgacgtgcgtattggccgcttcctgctcgatgaccag
gagcagctgcgcgacaccaacctggtggcgaactgggaccctgaaggtctgcacatccag
tcggcgacgctggcgcggggtgatctgcgcctgtcgctctccggcctgctcaagcccacc
caagggtggccattgcaggcgcagggcagcctcgatctgccggccgtgggcggcaagccc
tggtcgctgaagctgcaggtcgatggcgaactgcaaggtcacctgaagttgcaggcacag
agcagcggctacctcaatggccagttgcagggtgatgtgcagccgctggcggagaacctg
ccggcccaggccctggtgctggccgacggattcaaggcggatgccgcgctgcccgatacg
ctgacgctgaatcaggttcgcctgaacgccaatggtgatctgaagaacggctaccagatc
gccggcgcggccctgttgccggccgaagacagtccggtggtgctgaccctgcgtggccgc
gtcgatgcccagggggcggatatcgccgcactcgatctgacggccgcccaggtgcagcgc
ctgggcgtgcagggacggctcgactggaaggagggcttcgccgccgacgccacccttgac
tggctggacttcccctggcggcgcctgtacccggccatcgaggagccgccggtgagcgtg
cacagcctcaaggccgaggtgcagtatcgcgacggcgcctacctgggcaatttcgatgcc
gcgctgaacggtccggcgggcgcgttcaccctggccagtccggtctccggcaatctctcg
gaagtcttcctgccgtcgctgcaactggtggcggggcagggcaaggccgagggccatgtg
aaggtcggctttgccgacaccgtcagctgggacgccgacctcgacctgcgcgacctcgac
cccgcttactggctggagcagatgccgggccgcctgggcggaccgctgcgcagccagggc
tcgctcaagggcggcagcctgaacctgaccgcgaacctcgatctgcaagggcggctgcgt
ggtcagccagccttgctcagggcacgtgccgagggtgccgggcagtcgtggaaggccgac
gagttgaccctgcaactgggcgacaaccgcatcaccggccaagcggcgctggaccaacat
ctctccggcaagctggacctcgccctgaatcaattgggccaactgtggccgcagctcgcc
ggccaactgggcgggcgactcgacctggccggcaccctgcaggcaccgcaggggcaactg
gcgctcaacggccagcgcgtcgcctacgccggccagagcctgcgcagcctggcgctggac
gccaaactggatgccgcccagcgcggccgcctggacctgcaggttcagggcctgcgcagc
ggcgacacgcgcctgggcacgctcaagctggaaggcagcggcgacaagcagcgccagcag
ctctcgctgaacctgcaaggcaagccggtggtccttgcgctgaacctcgacggcacctgg
aacggccgcgactggcgcggccgcctggcgcagggtgacatccagagcggcgggcaggac
tggcgcctgcagcagccggcgaagctggagcggctggccgatggccggctgaccctgggc
gcgcattgctgggcctcgggcccggccagcctgtgcgccgaagaccagcgcctgatgccc
gacccgcgcctgcgtctgcatttgcgccagttcccgctggacagcctggcgcgctggctg
ccagaagacttcgcctggcgcggccagttggacggcgacgtgcaactggacctgccggcc
agcggcccgaacggttcgatcctgctcaatgccggcagcggcacgctgcgcctgaaggaa
caggacgactgggtcgacttcccctaccagagcctgcaactggaaagccgcctgacaccc
cggcgcatcgataccagcctgcagttccatggcgagaagctgggcacgctggatgcccag
gtgcagctcgacccccggccgaagtccaagccgctgagcggcagcttcagcctcaacggc
ttggacctgtccatcgcacggcccttcgtgcccgcggtggaaaccctcaagggacggctc
cacggtaacgggcggatttccggcgggctgctggcgccacgggtggacggcgagctgcgt
ctggtcgatggcgagatctccggcggcgacctgccgacgcgcctggaacagctgcaggtg
caggcgcgtatcgccggcgaacaggtggacctgagcggccactggacggccggggagcat
ggcaacggcaacctgtccgggcggatcgcctggaacgaggcgctggatgtcgacctgaac
gtgcgcggcaaccgtctgccggtgacgatcgacccgtacgcggaactggaggtcgcgccg
gacctggcgatccgcatggccggcgagggcctggccgtttccggcaaggtgcaggtgccc
agcggcgccatcaccattcgccagctcccgccgtcgacggtcaaggtgtcggacgacacc
gtgatcgtcggccagaagcaggagcagaaggccgccgccgcactgcacatggacgtcgac
gtgatcgtcggtgaggacaagctgaccttctccggctttggcctgaacgcggagctggcc
ggccaggtgcacgtgggcgacaacctcgacacccgtggcgagctgcgcctgaacaagggc
cgctaccgtgcctacgggcagaagctgaccatccgccgtgcgcgcctgctgttcgccgga
cccatcgaccagccgtacctggatatcgaggcgatccgcaaggtcgacgacgtgatcgcc
ggcctgcgcctgaccggtaacgccgagcagccgcgcagcgaggtgttctcggaaccggcg
atgagccagcagcaggcgctgtcctacctggtgctgggccggccgatgagcaccggcgag
gacagcaacatgatgggcgaggcggcgctggcgctgggcctggccggaagcgcgccgctc
accggcgaggtcgcgcagaagctgggcatccaggacttccagctggacaccgagggcacc
ggcaacagcaccagcgtggtcgccagcggccagctctccgacaagctcagcctgcgctat
ggcgtgggggtgttcgagccggccaataccatcgccttgcgctacctgctgagcaagaag
gtgtatctggaggcggccagcggcctggccagctcgctggatatcttctacaagcgcgac
ttctga
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