KEGG   Pseudomonas sp. W03: SD196_17295
Entry
SD196_17295       CDS       T11012                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pswo  Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:pswo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pswo02044]
    SD196_17295 (tssF)
Secretion system [BR:pswo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SD196_17295 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: XOT20696
LinkDB
Position
3790955..3792781
AA seq 608 aa
MSDSIDAELLDYYQRELTWLRHAGAGFAARYPKVARRLELGPGECGDPHVERLLEGFALL
AARLQRRLDDDYAQFSDALLEQLYPLALRPLPSCAVVRFEPDPAKGNLSAGYRLPRGTPL
FVSVPGQERIDLPEELRGQTLHWRTTDEVTLWPLRIAEAVLLGAEEAQAATGAAGIRAAL
RLDLRCLDKGGWAALAIDSLRIHLTANAVANAALFDLLGAHACGLMAEAEGAEPQRLGGL
PQLVGFDAEQALLPEDDRVHPGLRLLAEYFAFPDKFAFFDLPLHGLRASGEQLFLYILFD
HPASTRLNLQASDLALGCVPAINLFPRTSEPLRPDGTRSEYRLVADAHRENSVEIHSIRS
LRASTPQGVAEVAAYHGTQHRPGAPGLYWHARRVEGMTPNRRGSDLLLSLVDAALQPLED
MPQYSLSAELLCTNRSLAERLPAGTELSFERPGPVARATLLRAPSRQCQPGLDGPSRWQL
VSQLTLNHLSLVEGPQALDALREILSLHDFSEDKLAARQIEGLIALDCARVVDHVGSDAW
RGWRNGLEVRVHLERQAFVGGSAVLFSAVLAQFFSLYANANRFVRTVLVQSDQETCRWQP
QAGQPITL
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgagcgactcgattgacgctgaactgctggactactaccagcgcgagctgacctggctg
cgccacgccggcgcgggcttcgccgcgcgctatcccaaggtggcgcggcggctggaactg
ggccccggcgaatgcggcgacccccatgtcgaacgcctgctggaaggcttcgcactgttg
gccgcgcgcctgcagcgccgcctggacgacgactatgcacagttcagcgatgccctgctg
gaacagctctacccccttgccctgcgccccctgccctcctgcgccgtggtgcgcttcgag
ccagacccggccaagggcaacctgagcgccggctaccggctgccgcgcggcaccccgctg
ttcgtcagcgtgccgggccaggagcgcatcgacctgcccgaggaactgcgtggccagacc
ctgcactggcgcaccaccgatgaagtcacgctgtggccgctgcgcatcgccgaagccgtg
ctgctgggggccgaagaagcccaagccgccaccggcgccgccggcatccgcgccgccctg
cgtctggacctgcgctgcctcgacaagggcggctgggccgcgctggcaatcgacagtctg
cgcatccatctgaccgccaacgcggtggccaacgccgcgctgttcgacctgctcggcgcc
catgcctgcggcctcatggccgaagccgaaggcgccgagccgcagcgactgggaggcttg
ccgcaactggtcggcttcgatgccgaacaggccctgctgcccgaggacgaccgcgtccac
cccggcttgcgtctgctcgccgagtacttcgccttccccgacaaattcgccttcttcgat
ctgccgctccacgggctgcgcgccagcggcgagcagctgtttctctacatcctcttcgac
caccccgcgtccactcgcctgaacttgcaggccagcgacctggccttgggctgcgtaccg
gcaatcaacctgtttccgcgcacctccgaaccactacgaccagatggcacacgcagcgag
taccgactggtcgccgatgcccaccgcgagaactcggtggagatccacagcatccgttct
ctgcgcgccagcaccccgcaaggtgtggcggaggtcgcggcttaccacggcacccagcat
cgccccggcgcgccggggctctactggcacgcgcgccgggtcgaaggcatgacgcccaac
cgacgcggcagcgacctgctgctgagtctggtcgacgccgctctgcaaccgctggaagac
atgccgcaatacagcctgagcgccgagttactgtgcaccaaccgcagcctcgccgagcgc
ctgccggccgggaccgaactgtccttcgaacgccccggcccggtggcccgcgccaccctg
ctgcgcgcgccgagccggcaatgccagccaggcctggacggcccgtcgcgctggcaactg
gtctcgcaactgacgctcaaccacctgtccctggtggaaggtccgcaggccctggacgcc
ctgcgggaaatcctctcgctgcacgacttcagcgaagacaagctcgccgcccgccagatc
gagggactgattgcgctggactgcgcacgcgtggtcgaccacgtcggcagcgatgcctgg
cgcggctggcgcaacggcctggaggttcgcgtgcacctggagcgccaggccttcgtcggc
ggcagcgcggtgctgttcagcgccgtgctcgcgcagttcttctcgttgtacgccaacgcc
aaccgcttcgtgcgtacggtgctggtgcaatcggaccaggagacttgccgatggcaaccc
caggccggccagcccatcactctctga

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