Pseudomonas sp. W03: SD196_17305
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Entry
SD196_17305 CDS
T11012
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02025
Biofilm formation - Pseudomonas aeruginosa
pswo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SD196_17305 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
SD196_17305 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswo02044
]
SD196_17305 (tssH)
Secretion system [BR:
pswo02044
]
Type VI secretion system
Imp/Vas secretion system core components
SD196_17305 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_22
nSTAND3
AAA_16
Zeta_toxin
AAA_7
T2SSE
NBD_SMAX1
AAA_14
Sigma54_activat
AAA_25
IstB_IS21
ResIII
ClpB_D2-small
NACHT
AAA_23
DUF7310
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
XOT20698
LinkDB
All DBs
Position
3793758..3796310
Genome browser
AA seq
850 aa
AA seq
DB search
MDLASLIGRLNPESRRALERAAQRCLQRTHHYVEIEHLLLELLDIDGGDLARLLPRFGLE
RDQLVGEINTALELFRIGSTRTPALSPQTIGLLEDAVVQASVLGQPAIRSGLLLLALLDR
EERRALLLNSASSLLRIPHETLREKLLEWTEGSREQPPGARAPTKAAAASAAAQDSLLDQ
YTQDLTADAHAGRIDPIVGRDGEIRQCVDILLRRRQNNPILVGAPGVGKTAVVEGLALRI
AAGEVPPPLQGVILRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSSEQPIILFIDEAHTL
IGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDE
ATAVDMLRGVAAKLEQHHGVQVLDVAIQDAVKLSHRYISGRQLPDKAISVLDTACARVAL
AQHDVPPALENLRHRELAVEEELQRLRREQATGLDHSARITGLEQESAGNLATIRALEKR
WGEEREAVRELLQSRRELLTLSESADAAKPDEELDGRIDHLAAELARLEAGLDAIREDDP
LVPEQVDSKTVAAVIAGWTGIPVGKMLADEAHAIRTLAQRMGQRVMGQEAALGTIAQRIQ
AYRAGLTDPAKPVGVFLLLGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQ
LKGAPPGYVGYGSGGVLTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGL
VVDFKNTVILATSNVGAELLLDTPPEQIATPTFDDRLRKVLLQAFRAAFLARMTVVPYRP
LEEATLEGIVVAKLEKLRERYKAATGKQFDFDPVIVKAVLAKCSSAGARDIENVLMAEVT
GKLANWVLEP
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgccagcctgatcggccgcctcaacccggaatcccgccgcgccctggagcgc
gccgcgcagcgctgcctgcaacgcacccaccactatgtcgagatcgagcacctgctgctg
gagctgctggatatcgacggcggcgacctcgcccggctgctgccgcgcttcggcctggag
cgcgaccaactggtgggcgagatcaacacggcgctggagctgttccgcatcggcagcacg
cgcaccccggcgctttcgccgcagaccatcggcctgctggaggacgcagtggtacaagcc
agcgtgctcggccaaccggcgatccgctcgggactgctgctgctcgctctgctcgaccgc
gaggaacgccgcgccctgctactcaacagcgcatcctcgctgctgcgcattccccacgaa
acgctgcgggaaaagcttctggaatggaccgaaggctcccgcgaacagccacccggcgca
cgcgctccgaccaaggccgcagccgccagcgcagcggcccaggacagcctgcttgaccaa
tacacccaggacctcacagccgacgcccacgccgggcgcatcgaccccatcgtcgggcgc
gacggcgagatccgccagtgcgtggacatcctcctgcgccgccggcagaacaacccgatc
ctggtcggcgcgcccggcgtcggcaagaccgccgtagtggaaggcctcgccctgcgcatc
gccgccggagaagtgccgccgcccctgcaaggcgtgatcctgcgcgtactcgacctcgga
ttgctgcaggccggcgccggggtcaagggcgagttcgaacaacgcctgaagggcgtgatc
gatgcggtgcgcagcagcgagcagccgatcatcctgttcatcgacgaggcccataccctg
atcggcgccggcggcgcggaaggcggcagcgacgccgccaacctgctcaagccggccctg
gcccgtggcgagctgcgcaccctggccgccaccacctggctggaatacaagaagtacttc
gagaaggaccccgcgctggcccggcgcttccaactggtacaggtggaagaacccgacgag
gccaccgccgtggacatgctgcgcggcgtcgccgccaagctcgaacagcaccacggcgtg
caggtgctggacgtggccatccaggacgcagtgaaactctcacaccgctacatctccggc
cgtcagctgccggacaaggccatcagcgtgctggacaccgcctgcgcccgcgtcgccctc
gcccaacacgacgtgcctccggccctggagaacctgcgccaccgtgaactggcggtggaa
gaagagctgcagcgcctgcgccgtgaacaagccaccggcctggaccacagcgcacgcatc
accggcctggagcaggagtcagccggcaacctggcgaccatccgcgccctggaaaaacgt
tggggcgaagaacgcgaggcggtacgcgaactgctgcagtcacgccgcgaactgctgacc
ctgagcgagagcgccgacgccgccaaacccgacgaggaactcgacggccgcatcgatcat
ctggccgccgaactggcgcgcctggaagccggcctcgacgccatccgcgaagacgacccg
ctggtacccgaacaggtcgactccaagaccgtggccgcggtgatcgccggctggaccggc
atcccggtgggcaagatgctcgccgacgaagcccatgccatccgcaccctggcccagcgc
atgggccagcgcgtaatgggccaggaagcggcgctgggcaccatcgcccagcgcatccag
gcctaccgcgccggcctcaccgacccggccaagccggtgggcgtattcctcctgctcggc
cccaccggcgtgggcaagaccgagaccgcctacgccctggccgacgccctctatggcggc
gagcgcaacctcatcagcatcaacctttccgagtaccaggaagcccacaccgtcagccaa
ctcaagggcgccccgcccggctacgtcggctacggcagcggtggcgtactcaccgaagcc
gtgcgccgccgcccctactcggtggtgctgctggatgaaatcgaaaaggcccacccggac
gtgctggaggccttctacaacgtcttcgacaagggcgtgatggaggacggcaccggcctg
gtggtggacttcaagaacaccgtgatcctcgccaccagcaacgtcggcgccgagctgctg
ctggacaccccgcccgaacagatcgccacgcccaccttcgacgaccgcctgcgcaaggtg
ctgctacaagccttccgcgccgccttcctcgcgcgcatgaccgtagtgccctaccggccg
ctggaggaggcgacgctggaaggcatcgtcgtcgccaagctggaaaagctgcgtgagcgc
tacaaggcggcgaccggtaagcagttcgatttcgatccggtgatcgtgaaagcggtgctc
gccaagtgcagctcggcgggcgcgcgggatatcgagaatgtgttgatggcggaagtcacc
ggcaagttggccaactgggtgctggaaccctag
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