Pseudomonas sp. W03: SD196_17470
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Entry
SD196_17470 CDS
T11012
Name
(GenBank) response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
pswo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_17470
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_17470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pswo02022
]
SD196_17470
Two-component system [BR:
pswo02022
]
OmpR family
QseC-QseB (quorum sensing)
SD196_17470
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Phage_TAC_6
Motif
Other DBs
NCBI-ProteinID:
XOT20730
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Position
3825238..3825894
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AA seq
218 aa
AA seq
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MRLLLVEDDQALGEGVRTGLRQEGYTIDWLQDGASALHALQTEEFDLVVLDLGLPRLDGL
QVLGRVRASGSTVPVLILTARDATDDRIAGLDAGADDYLVKPFDLDELRARLRALLRRSS
GRARVLIEHAGVSLDPSTQQVHFQGQLVVLTPKEYQLLHELLAQPGKVFTRDRLTQLLYG
WDESAESNTLEVHISHLRKKLFSGLIRTVRGIGYLVEA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgctgttggtggaggatgaccaggccctgggcgaaggcgtacgcaccggcctg
cgccaggagggctacaccatcgactggttgcaggatggcgccagcgcgttgcacgctttg
cagaccgaggagttcgacctggtggtgctcgacctcgggctgcccaggctcgacggcctg
caggtgctcggccgcgtgcgcgcttccggctcgacggtcccggtgctcatcctcaccgcc
cgcgacgccaccgacgaccgcatcgccgggctggacgcgggcgccgacgattacctggtc
aagcccttcgacctcgacgaactacgggcccgcctgcgcgcgctgctgcgccgcagcagc
ggccgggcacgggtgctgatcgagcacgccggggtcagcctcgacccgtcgacccagcaa
gtccacttccagggccagcttgtggtgctcacgcccaaggagtaccagttgctgcacgag
ctgctggcgcaaccgggcaaggtcttcacccgcgaccgcctgacccagttgctctacggc
tgggatgaaagcgccgaaagcaacaccctggaagtgcacatctcgcacctgcgcaagaag
ctgttcagcggcctgatccgcaccgtgcgcggcatcggttatctggtggaagcctga
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