Pseudomonas sp. W03: SD196_18115
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Entry
SD196_18115 CDS
T11012
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
pswo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_18115
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
SD196_18115
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswo01001
]
SD196_18115
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pswo02022
]
SD196_18115
Enzymes [BR:
pswo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SD196_18115
Protein kinases [BR:
pswo01001
]
Histidine kinases
Other
SD196_18115
Two-component system [BR:
pswo02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
SD196_18115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HATPase_c_2
HATPase_c_3
CHASE8
P5-ATPase
Receiver_CRE1
Castor_Poll_mid
CREPT
Motif
Other DBs
NCBI-ProteinID:
XOT20854
LinkDB
All DBs
Position
3971672..3973993
Genome browser
AA seq
773 aa
AA seq
DB search
MDIALTHRLSFKQASLTVLVAFLLGTLLSLIQVGVDYASQDASINREVRALLDVSHNPAA
RIAYNIDAELAQELVVGLLRSPAVIRAEIIDNAGTPLASANRPLAQSHLRGLSDFLFGEQ
RSYEEPLFVDHAPTESLGVLRLEIDTFVFGNDFLRRAGMTFISGFIRSLLLSLILLVLFY
GLLTKPLVSLIDALSRHDPRSPSRLRLPCPSGHEHDEIGVLVEVTNRQLNRISVEMEQRR
EAEDRLTQYLEELESIVAARTAELKAANARLTLSNQELEQARQTALAMAQARGSFLANMS
HEIRTPLNGLLGMLGLALDGPLTTEQRQQLSIAHDSGKVLLELLNDVLDLSKFEAGQLEL
ERIPFDLGTLVEDTASLLSQNAAPAVELTCLISSKLPAQHAGDPTRVRQVVSNLLSNALK
FTRLGRVDICVEPQGNGVRISVRDTGIGIAPEALQKIFQPFTQADAGIARQYGGTGLGLA
LTRKLCEAMKGELVVKSEPGFGSEFIATLPLPALEPAQSLPPLNGRLIVQCAASSGLATL
LEHWLPHWNVEYQRLDIDASLAGMTLDALLSDCPDCLITLRRHVAKPVLLVTAYGNFLEQ
PLAQSLAPLRQLARPLSREVLYQALKQAFEHQPLPVPSDAGTTPAERFSARVLLVEDNPV
NQLVAKGLLQKLGCIVAVATNGEEALAQLGDGTFDLVLMDCNMPVMDGYQATQAIRESGR
WPGLPVIALTANVLPDERERCRAAGMDDYLAKPFHRDELAAILERWVDHRPRS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcgctcacccatcgcctctcgttcaagcaggccagcctgaccgtgctggtg
gccttcctgctggggacgctgctcagccttatccaggttggcgtcgattatgccagccag
gacgcctccatcaaccgcgaagttcgcgccctgctggacgtcagccacaaccccgccgcc
cgcatcgcctacaacattgacgccgaactggcccaggaactggtggtcggcctgttgcgc
tcgccggcggtgatccgcgccgagatcatcgacaacgccggtacgcccctggccagtgcc
aaccggccgctcgcgcagagccatctgcgtggtctgagcgactttctcttcggcgagcag
cgcagctacgaagagccgctgttcgtcgatcacgcgccgaccgagtcgctcggcgtgctg
cgcctggagatcgacaccttcgtgttcggcaacgacttcctgcgtcgggccggcatgacc
ttcatctccggcttcatccgcagcctgctgctgtcactgatcctgctggtgctgttctac
gggctgctgaccaagccgctggtgagcctgatagacgccctcagccgtcacgatccccgc
tcgccctcgcgtctgcgtctgccctgcccgagcggccatgagcacgacgagatcggtgtg
ctggtggaggtcaccaaccgccagctcaatcgcatctcggtggaaatggaacagcggcgc
gaagccgaggaccgcctcacccagtacctggaagaactggaaagcatcgtcgcggcgcgc
accgccgagctgaaggccgcgaacgcacgcctcaccctgtccaaccaggagctggaacag
gcccggcagaccgcgctggccatggcccaggcccgcggcagcttcctggccaatatgagc
cacgagatccgcacccctctcaacggcctgctgggaatgctcggcctggccctggacggc
ccgctgaccaccgagcagcgccagcagctgtccatcgcccacgactcgggcaaggtgctg
ctggagctgctcaacgacgtgctcgacctgtccaagttcgaggccggccaactggagctg
gagcgaatccccttcgacctgggcaccctggtggaagacaccgccagcctgctgtcgcag
aatgccgcgcccgccgtggagctcacctgcctgatcagctcgaagttgccggcacaacac
gcaggggacccgacgcgggtgcgccaggtggtgagcaacctgctgtccaatgccctgaag
ttcacccgcctggggcgcgtcgacatctgcgtcgagccccaaggcaacggcgtacgcatc
agcgtgcgcgacaccggcatcggcatcgcccccgaagccctgcagaagatcttccagccc
ttcacccaggccgacgctggcatcgcccgccagtacggcggcacgggcctgggcctggcg
ctgacgcgcaagctgtgcgaggcgatgaagggcgaactggtggtgaagtccgagcccgga
ttcggcagcgaattcatcgccacccttccgctgccggcgctggaacccgcccagtcgctg
cccccgctgaatggccggctgatcgtgcaatgcgccgccagcagcggcctggcgacatta
ctggaacactggctgccgcactggaatgtcgagtaccagcgcctggacatcgacgcgagc
ctggccggcatgacgctggacgcgctgctctcggattgcccggactgcctgatcaccctg
cgccggcacgtggccaagcccgtcctgctggtcaccgcctacggcaacttcctcgaacag
ccgctggcccagagcctggcgcccttgcgccagctggcccggccgttatcgcgggaagtg
ctgtaccaggccctcaagcaggcgttcgaacatcaaccgctgccggttccttccgacgcc
ggcaccacgccggcggagcgcttctcggcgcgggtgctgctggtggaggacaacccagtc
aaccagttggtggccaagggcttgctgcagaaactcggctgcatcgtggccgtcgccact
aacggtgaagaggcactggcacaactgggcgatggcaccttcgacctggtgctgatggac
tgcaacatgcccgtgatggatggctaccaggccacccaggcaattcgcgaaagcggacgc
tggccgggcctgccggtcatcgccctgaccgccaacgtcctgccggacgagcgcgagcgc
tgccgcgccgccggcatggacgactacctggccaagcctttccaccgcgacgaactggcg
gcgatcctggagcgctgggtggatcaccgcccgcgcagctga
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