Pseudomonas sp. W03: SD196_20905
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Entry
SD196_20905 CDS
T11012
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_20905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_20905
Transporters [BR:
pswo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SD196_20905
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XOT21378
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Position
4585300..4586238
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AA seq
312 aa
AA seq
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MNAALPAASNGPLRRLSNLLYRKPTLYLSLLLIPPLLWFGAIYLGSLLTLLWQGFYTFDD
FTMTVTPDLTWANFGSLFSGSNFDIIQRTVLMAVAVSIASGAVAFPIAYYMARYTTGKTK
AFFYIAVMMPMWASYIVKAYAWTLLLAKGGVAMWFVQHLGLEPVLNLLLGIPGIGGNTLS
TSSFGRFLVFVYIWLPFMILPIQASLERLPPSLLQASADLGAHPRQTFFQVILPLSIPGI
AAGSIFTFSLTLGDFIVPQLVGPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAVYL
SIVKRLGAFDAL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcgctgccggcggccagcaatggtccgctgcgccgcctgtccaacctgctc
taccgcaagccgacgctgtacctctcgctgctgctgatcccgccgctgctgtggttcggc
gcgatctacctgggctcgctgctgacgctgctgtggcagggtttctacaccttcgacgac
ttcaccatgacggtgacgccggacctgacctgggccaacttcggctcgctgttcagtggc
tccaacttcgacatcatccagcgcaccgtgctgatggcggtcgcggtgtccatcgccagc
ggcgcggtggccttccccatcgcctactacatggcgcgctacaccaccggcaagaccaag
gcgttcttctacatcgccgtgatgatgccgatgtgggccagctacatcgtcaaggcctac
gcctggaccctgctgctggccaagggcggcgtggcgatgtggttcgtccagcacctgggc
ctggagcctgtactgaacctgctgctgggcattccggggatcggtggcaacaccctgtcc
acctccagcttcggccgcttcctggtgttcgtgtacatctggctgccattcatgatcctg
ccgatccaggcctccctggagcgcctgccgccgtccctgctgcaagcctcggcggatctc
ggcgcgcacccgcggcagaccttcttccaggtcatcctgccgctgtcgatccccggtatc
gccgccggctcgatcttcaccttcagcctgaccctgggcgacttcatcgtgccgcaactg
gtgggcccgccgggctacttcatcggcagcatggtctacgcccagcagggcgcgatcggc
aacatgccgatggccgccgccttcaccctggtgcccatcgtgctgatcgccgtgtacctg
tccatcgtcaaacgtctgggggccttcgatgcactctga
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