KEGG   Pseudomonas sp. W03: SD196_21010
Entry
SD196_21010       CDS       T11012                                 
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
pswo  Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:pswo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswo03036]
    SD196_21010 (xerD)
Chromosome and associated proteins [BR:pswo03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SD196_21010 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 DUF3435 Vault_4
Other DBs
NCBI-ProteinID: XOT21399
LinkDB
Position
complement(4609186..4610082)
AA seq 298 aa
MMPVSHSLIDRFLDALWLEKGLSDNTRSAYGSDLALFNGWLDERGVALESAGREVILDHL
AWRLGEGYKARSTARFLSGLRGFYRYCLREGLIEEDPTLLVELPQLGKPLPKSLSEADVE
ALLAAPETDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQVNLRQGVVRVMGKGSKERLV
PLGEEAILWIERYMREARADLLGGRPSDVLFPSLRGEQMTRQTFWHRIKLHAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHAQHHPRG
NT seq 897 nt   +upstreamnt  +downstreamnt
atgatgccggtttcacattcactgatcgaccgattcctcgacgccctctggttggaaaag
ggtctctccgacaacactcgcagcgcctacggcagcgacctcgcgctgttcaacggctgg
ctcgacgagcgcggggtggcgctggagtcggcagggcgcgaggtgatcctcgatcatctg
gcctggcgcctgggcgagggttataaggcccgctccacggcgcgcttcctctcggggctg
cgcggcttctatcgttactgcctgcgagaagggttgatcgaggaggacccgacgctgctg
gtggaactgccgcaactgggcaagccgctgcccaagtcgctctcggaggccgatgtcgaa
gcgctgctggcggcgccggagaccgacgatccgctcggcctgcgcgatcgcaccatgctg
gaggtgctctacgcctgcgggctgcgggtcagtgaattggtcgggctgaccctggagcag
gtcaacctgcgccagggcgtggtgcgcgtcatgggcaagggcagcaaggagcggctggtg
cctctgggggaggaagccatcctgtggatcgagcgctacatgcgcgaagcgcgggcggac
ctgctgggcgggcgccccagtgacgtgctgttccccagtctgcggggcgagcagatgacc
cgccagaccttctggcaccgcatcaagctgcacgcgaaagtcgccggcatcggcaagagc
ctgtcaccacacaccctgcgccatgccttcgccacccatctgctcaaccacggagccgac
ctgcgtgtggtacagatgctgctggggcacagtgatctttccaccacgcagatctacacc
catatcgcccgggcgcgcctgcaggacctgcatgcacagcatcaccccagggggtga

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