Pseudomonas sp. W03: SD196_21010
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Entry
SD196_21010 CDS
T11012
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswo03036
]
SD196_21010 (xerD)
Chromosome and associated proteins [BR:
pswo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SD196_21010 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Vault_4
Motif
Other DBs
NCBI-ProteinID:
XOT21399
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Position
complement(4609186..4610082)
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AA seq
298 aa
AA seq
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MMPVSHSLIDRFLDALWLEKGLSDNTRSAYGSDLALFNGWLDERGVALESAGREVILDHL
AWRLGEGYKARSTARFLSGLRGFYRYCLREGLIEEDPTLLVELPQLGKPLPKSLSEADVE
ALLAAPETDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQVNLRQGVVRVMGKGSKERLV
PLGEEAILWIERYMREARADLLGGRPSDVLFPSLRGEQMTRQTFWHRIKLHAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggtttcacattcactgatcgaccgattcctcgacgccctctggttggaaaag
ggtctctccgacaacactcgcagcgcctacggcagcgacctcgcgctgttcaacggctgg
ctcgacgagcgcggggtggcgctggagtcggcagggcgcgaggtgatcctcgatcatctg
gcctggcgcctgggcgagggttataaggcccgctccacggcgcgcttcctctcggggctg
cgcggcttctatcgttactgcctgcgagaagggttgatcgaggaggacccgacgctgctg
gtggaactgccgcaactgggcaagccgctgcccaagtcgctctcggaggccgatgtcgaa
gcgctgctggcggcgccggagaccgacgatccgctcggcctgcgcgatcgcaccatgctg
gaggtgctctacgcctgcgggctgcgggtcagtgaattggtcgggctgaccctggagcag
gtcaacctgcgccagggcgtggtgcgcgtcatgggcaagggcagcaaggagcggctggtg
cctctgggggaggaagccatcctgtggatcgagcgctacatgcgcgaagcgcgggcggac
ctgctgggcgggcgccccagtgacgtgctgttccccagtctgcggggcgagcagatgacc
cgccagaccttctggcaccgcatcaagctgcacgcgaaagtcgccggcatcggcaagagc
ctgtcaccacacaccctgcgccatgccttcgccacccatctgctcaaccacggagccgac
ctgcgtgtggtacagatgctgctggggcacagtgatctttccaccacgcagatctacacc
catatcgcccgggcgcgcctgcaggacctgcatgcacagcatcaccccagggggtga
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