Pseudomonas sp. W03: SD196_21050
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Entry
SD196_21050 CDS
T11012
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02024
Quorum sensing
pswo03060
Protein export
pswo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SD196_21050 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SD196_21050 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_21050 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswo02044
]
SD196_21050 (ffh)
Enzymes [BR:
pswo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SD196_21050 (ffh)
Secretion system [BR:
pswo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SD196_21050 (ffh)
Eukaryotic Sec-SRP protein
SD196_21050 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
YqeC
APS_kinase
AAA_33
AAA_24
AAA_31
cobW
AAA_30
ABC_tran
Mg_chelatase
AAA_17
KTI12
nSTAND3
AAA_16
6PF2K
Thymidylate_kin
AAA_14
AAA_18
SLFN-g3_helicase
PaREP1
DO-GTPase1
ArsA_ATPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
XOT21407
LinkDB
All DBs
Position
complement(4615522..4616895)
Genome browser
AA seq
457 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVAKIKDRAV
GTEVSKSLTPGQAFVKIVQAELVELMGAANEDLDLAAAPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKSVLVVSADVYRPAAIKQLETLANDIGVTFFPSDTSQKPVAIAEAAIREAK
LKFIDVVIVDTAGRLHVDAEMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVVLTKVDGDARGGAALSVRAITGKPIKFLGMGEKSEALDPFHPDRVASRILGMGDV
LSLIEQAEQNMDREKAEKLAKKIKKGKGFDLEDFRDQLQQMKNMGGLGSLMDKLPMLGGV
NLSQMGNAQNAAEKQFKQMEAIINSMTPAERRDPEVISGSRKRRIALGSGTQVQDVGRLI
KQHKQMQKVMKKVTAKGGMAKMMRGMGSMFPGGMPKM
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaccttacagatcgcctttcgcaaacgctgcgccacgttaccggcaaggcc
aagctgaccgaggacaacatcaaggacacgctccgcgaagtgcggatggccctgctggag
gccgacgtggccctgccggtggtcaaggacttcgtcgccaagatcaaggatcgcgcggtc
ggcaccgaggtttccaagagcctgaccccgggccaggccttcgtgaagatcgtccaggcc
gaactggtcgagctgatgggcgcggccaacgaggacctcgatctcgccgccgctccaccg
gcggtcatcctgatggccggcctgcagggcgcgggcaagaccaccaccgccggcaagctg
gcgcgcttcctcaaggagcgcaagaagaagtccgtgctggtggtatccgccgacgtttac
cgcccggcggcgatcaagcagctggaaaccctggccaatgacatcggcgtgaccttcttc
ccgtccgataccagccagaagccggtggccatcgctgaagctgcgatccgcgaggcgaag
ctgaagttcatcgacgtggtgatcgtggataccgccggtcgcctgcacgtcgacgccgag
atgatggacgagatcaagcaggtccacgcggcgatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggtcaggacgctgccaacaccgccaaggccttcaacgacgccctt
ccgctgaccggcgtggtgctgaccaaggtcgacggcgacgcccgtggcggtgccgcgctg
tccgtgcgcgccatcaccggcaagccgatcaagttcctcggcatgggcgagaagagcgaa
gcgctcgatccgttccaccccgaccgcgtggcctcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgagcagaacatggaccgcgagaaggccgagaagctcgcg
aagaagatcaagaagggcaagggcttcgacctcgaagacttccgcgaccagctgcagcag
atgaagaacatgggcggcctgggcagcctgatggacaagctgccgatgctcggcggcgtc
aacctgtcgcagatgggcaacgcgcagaacgcggcggagaagcagttcaagcagatggag
gcgatcatcaactccatgaccccggccgagcgccgtgacccggaagtgatcagtggttcg
cgcaagcgccgcatcgccctgggttccggtacccaggttcaggatgtcggccgtctcatc
aagcagcacaagcagatgcagaaggtaatgaagaaggtcaccgccaagggtggcatggcg
aagatgatgcgcggcatgggcagcatgttccccggcggcatgcccaagatgtga
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