Pseudomonas sp. W03: SD196_21370
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Entry
SD196_21370 CDS
T11012
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswo02044
]
SD196_21370
02035 Bacterial motility proteins [BR:
pswo02035
]
SD196_21370
Secretion system [BR:
pswo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SD196_21370
Bacterial motility proteins [BR:
pswo02035
]
Pilus system
Pilus assembly proteins
SD196_21370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ
Motif
Other DBs
NCBI-ProteinID:
XOT21465
LinkDB
All DBs
Position
complement(4680631..4683693)
Genome browser
AA seq
1020 aa
AA seq
DB search
MKTHGNVSVRLWRVFAFCALCIAYSMARAEDIDLFVGTPPNSADAPNVLIVLDNTANWNT
PFDNEKAALVSVVNGLQANKFRVGLMMFTETGGGDKGNDGAYVRAAIRLLDAGTKTKYQT
LVGSLDVGGDKSNGGKISKAMEEAWLYYSASAPYAGNKKVKTDYTGNTSGSTASNAIYAL
SGNALSAKDGSPYNNPIVTGCAKNFIIYISNGAAQDNNNDITQATAALSAAGGNTSAIPI
SPSGSQDNVADEWARFMKKSSLGITTYTVDINKVTTGQGPGWTALLKSMANVSSGKYFDV
TSNGTEIADALNAIFSEIQATNSVFASVTLPVSVNTQSTYLNQVYVGMFRPDADSFPRWA
GNLKQYKLGMVNGKLQTVDAAGNSAINSATGFITECARSFWTPSTTDGYWAFKPQGNCLT
VPGSDVSNYPDGNIVEKGAQAYKLRQDSARTMKTCAPTGCSTLTDFNTSNAAITQTLLGA
ASSTERDNLINWAVGSDNQDENTNSNVTEMRPSVHGDVVHSRPAAINYGTTAAPQVVVYY
GGNDGLLHAINGNRTTNIGSVTPGSEIWSFMPPEFYPSIKRLRDNSVTISFPGHTTGTPT
PQPKSYGMDGSVSAVQQGSSTWIYSAMRRGGRSIYAFDVTTPASPVLKWKLGCPNMDNDT
GCSTGFDGIGQTWATPTALKAAGYSSGNATMLAMGGGYDTCEDGDPNTCTASSKGNKIYL
LNADTGALLKTFATDRGVVGDVTILTDDNGLATYGYAADLGGNIYRISGVDAASAIGTAA
PANWTITKIAALGCDTASSCTANRKFMYGPEVAVSNGEYVIAVGSGDREKPILAYTSASS
VSNRFYSLRDKPSDPTWLTSENSTCSANLICNASLLAITTTATPSTSDLNAHPKGWYLAL
QSTEQVVTSALVLFDTIIFSTHQPAVVSATSCVSLGTARNYNINYKNAAGSNGDRFSVIA
GGGLAPSPVAGVVILDDGTQKPFIIGGGNCATDSSLQGCEAVPPASGIRPKSWVYWNIER
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcatggcaatgtctcggtccgcctctggcgagtgtttgcattctgcgccctg
tgcatcgcgtactcgatggctcgcgctgaggacatcgacctgttcgtcggcacgccaccc
aactctgcggatgcgcctaacgtattgatcgtcctcgacaacacagccaactggaacact
ccttttgacaatgagaaggccgcgctggtgtcggtagtcaatggactccaggcgaacaag
ttccgtgttggcctgatgatgttcactgagactggtggcggtgacaaaggcaatgacggt
gcctatgtccgggctgccatacgtttgcttgatgcaggcaccaagaccaagtaccagacc
ttggttggcagtttggacgttggaggtgacaaatccaacggtggcaagatcagcaaggcc
atggaagaggcctggctctattactcggcgagtgccccttatgccggtaacaagaaggta
aagacggactatacgggaaatacctccggtagtaccgcttccaacgcaatctacgcgctt
agcggcaatgctctgtcggcgaaggatggcagtccgtataacaaccctatcgtcactggc
tgcgcgaaaaatttcatcatctacatcagcaacggcgcggcacaggacaataacaacgac
atcacacaagccaccgcagcgctgtctgcagcgggaggcaacacctccgcgattccgatt
tcgcccagcggctcgcaggataatgtggcagatgaatgggcgcgcttcatgaagaagagc
agccttggcattaccacctatacagtggatatcaacaaggtcaccactggtcaggggcca
ggatggaccgctttgctcaagagcatggccaacgtcagcagcggtaagtacttcgacgtg
acgtccaacggcacggagatcgccgatgcgctgaacgctatcttctccgagattcaagca
accaacagtgtgttcgcctcggtcaccctgccggtgagcgtgaatacccagagcacctac
ttgaaccaagtgtatgtcggcatgttccgtccggatgccgattcattcccgcgctgggct
ggcaacctcaagcaatacaagctggggatggtcaacggcaagctgcaaacggtggatgcc
gccggcaatagcgcgatcaacagcgcaaccggcttcatcaccgagtgtgcgaggagcttc
tggacgcctagcactacggacggttactgggccttcaagccgcaaggcaactgcctgaca
gtgcccggctcggatgtttccaactaccccgatggcaatatcgttgagaagggcgctcaa
gcctataagttacgccaggacagcgctcgcacgatgaagacttgtgccccgacggggtgc
agcacactcactgacttcaatacgagcaacgcagcgattacccagacattgctgggtgcc
gccagcagtaccgagcgcgacaatctcatcaactgggcggtgggttccgataaccaggac
gaaaacaccaacagcaacgtgaccgagatgcgcccatcggttcacggcgacgtcgtgcat
tcgcgtccggccgccatcaactatggtacgactgccgccccccaggtggtcgtctactac
ggagggaacgatggcctgctgcatgccatcaacggcaaccgcaccactaacatcggttcg
gtgactcctggtagcgagatttggtcgttcatgccaccggagttctatccgagcatcaag
cggctgcgcgacaacagcgtgactatcagtttccctggccataccactggtacgcccacg
ccgcagcccaagtcctatggcatggatggctcggttagcgcggtgcagcaaggctctagc
acctggatctattccgccatgcgtcgtggtgggcgatcgatctacgcattcgatgtcacg
actcctgccagcccggtgctgaaatggaagctgggctgcccaaacatggataatgacacc
ggctgtagtaccggtttcgacggcatcggccagacctgggcaactccgaccgccctcaag
gcggcgggttacagcagcgggaatgcgacgatgctggccatgggaggcggttacgacacc
tgtgaggatggtgatcccaatacctgcaccgccagctccaagggcaataagatctatctg
ctgaatgctgatactggcgcgctgctcaagaccttcgccacggatcgtggcgtggtgggg
gatgtgaccatactcaccgacgacaatggcttggctacctatggttatgccgcggatctt
ggaggcaatatttaccgcatctccggggtcgatgctgctagcgccattggtacagctgca
ccggccaactggaccatcaccaagattgccgcgctggggtgtgacaccgcttccagctgc
acggcgaatcgcaagttcatgtacggtcctgaagttgcggtgagcaatggcgagtatgtg
atcgctgtcggctcaggcgatcgtgagaagcctatcctcgcctatacctccgccagttct
gtgtccaaccgcttctacagcctgcgggacaagccctctgacccgacctggctgacctcg
gagaactcgacttgtagtgccaatctaatctgcaacgcttcgttgctggctattacgacc
accgcgacgccatcgaccagcgacctaaacgctcatccgaagggctggtatctggcattg
caatcgacggagcaggtggtgacttcggcgttggtgttgttcgataccattattttcagt
acccaccaaccggcggtggtcagtgcgaccagttgtgtcagtctcgggacggcacgtaat
tacaacatcaactacaagaatgccgccggttccaatggcgatcgcttttcggtgattgcg
ggcggcgggctggccccgtcgccagtggctggcgtcgtcatcctcgatgatggaactcag
aagccattcattatcggtggcggtaactgtgctaccgactcttcgctgcagggatgcgaa
gccgttccgccagcttcgggtatccggccgaagtcctgggtgtactggaacatcgagcga
tag
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