Pseudomonas sp. W03: SD196_21455
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Entry
SD196_21455 CDS
T11012
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswo03009
]
SD196_21455 (rlmF)
Enzymes [BR:
pswo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
SD196_21455 (rlmF)
Ribosome biogenesis [BR:
pswo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SD196_21455 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
XOT21481
LinkDB
All DBs
Position
4701873..4702883
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AA seq
336 aa
AA seq
DB search
MSKSPKPPKRPATPAQSLRDPAAKRPNLLHPRNRHQGHYDFPALIEGCPALGRFVITNPY
GKPSIDFANPEAVRVFNRALLKAQYGIAQWDIPAGFLCPPIPGRADYVHYLADLLGEENA
GRVPRGPEVRVLDIGVGANCIYPLIGHRDYGWRFLGSDIEPAALASAHAILNGNPGLNEA
IELRQQHDPKHIFRGLLGADERFDATLCNPPFHASPEEASSGSRRKWKNLGKLDPSRQLP
KLNFGGQSNELWCEGGEIAFLRKLAAESAGVGKQVLWFSSLVSKAGNLDEFRRALKKAGA
VTVRSVDMAQGQKQSRFVAWTFLEPEQRATWRAQWQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcgccgaaaccaccgaaacgccccgccacgcccgctcagagcctgcgcgac
cccgccgccaagcggccgaacctgctgcacccgcgcaaccggcaccaggggcattacgac
ttcccggcgctgatcgagggctgtccggcgctgggccgcttcgtcatcaccaatccctac
ggcaagccgagcatcgacttcgccaatcccgaggccgtgcgcgtgttcaaccgcgcgctg
ctcaaggcgcagtacggcatcgcccagtgggacatccccgccggcttcctctgcccaccg
attccgggccgcgccgactacgtgcactacctggccgacctgctcggcgaggagaacgcc
ggccgggttccacgcgggccggaggtgcgcgtgctggatatcggcgtcggcgccaactgc
atctacccgctgatcggccaccgcgactacggctggcgcttcctcggctcagacatcgag
cccgccgccctcgcctcggcccacgccatcctgaacggcaaccccggcctcaacgaagcc
atcgaactgcgccagcagcacgaccccaagcacatcttccgtggcctgctgggtgccgat
gaacgcttcgacgcgaccctgtgcaacccacccttccacgcatcgcccgaggaagccagc
agcggcagccggcgcaaatggaagaacctcggcaagctcgacccgtcgcgccagctaccg
aagctgaactttggcgggcagagcaacgagctgtggtgcgaaggcggtgagatcgccttc
ctgcgcaagctggcggcggaaagcgcgggagtcggcaagcaggtgctgtggttcagttcg
ctggtgtccaaggccggcaatctcgacgagttccgccgcgccctgaagaaggccggcgcc
gtcaccgtgcgcagcgtggacatggcccagggccagaagcagagccgcttcgtcgcctgg
accttcctcgaacccgagcaacgcgcgacatggcgcgcacagtggcaatga
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