Pseudomonas sp. W03: SD196_22710
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Entry
SD196_22710 CDS
T11012
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswo03400
]
SD196_22710 (phrB)
Enzymes [BR:
pswo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SD196_22710 (phrB)
DNA repair and recombination proteins [BR:
pswo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SD196_22710 (phrB)
Prokaryotic type
SD196_22710 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XOT21717
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All DBs
Position
4973280..4974707
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AA seq
475 aa
AA seq
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MKRQLVWLRTDLRLRDNTALAAAAERGPAIALFLLSPGQWREHDDAACKVDFWLRNLREL
RAGLAALNIPLLVRTADRWSDAPRVITELCRHHDIETVHVNEEYGLHEARRDAAVKRELA
GQGVELRSYLDQLLFAPGTLLTKGGGYFQVYSQFRKLCYERLNLGAPSLQPAPRPQAPLE
LASDPLPECIDGFESPTEDLRSHWPAGETEAHERLEAFTDERLGGYHDRRDFPASDGTSQ
LSPYLAAGVLSPRQCLHAALANNHGEFETGNSGAVSWINELLWREFYKHILVGFPRVSRH
RAFREDTEKLNWRHDRQDLEAWQQGRTGFPIIDAAMRQLLATGWMHNRLRMVVAMFLTKN
LLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPISQSERFDPDGRF
IRRWLPELAGVEGRAIHDPSRLGLFGAAGYPQPMVDLSATRERALEAFKGLSVQP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcaactcgtctggctgcgcaccgacctgcgcctgcgtgacaacaccgccctg
gcggccgccgccgaacgcgggccggccatcgccctgttcctgctcagccctggccagtgg
cgcgagcacgacgatgccgcctgcaaggtggacttctggctgcgcaacctgcgagagctg
cgcgccgggcttgccgcgctcaatatcccactgctggtacgcacggcggatcgctggagc
gacgcgccccgggtgatcaccgaactgtgccgccaccatgacatcgagacagtgcacgtc
aacgaggaatacggcctgcacgaagcccgccgggacgccgccgtgaagcgtgagctggcc
ggccagggtgtcgaactgcgcagctacctcgaccaactgctcttcgcccccggcaccctg
ctcaccaagggcggcggctacttccaggtctacagccagttccgcaagctctgctacgag
cgcctgaacctgggtgctccctcgttgcagccggcgccgcgtcctcaggcgccgctggaa
ctggccagcgatccgctgcccgaatgcatcgacggcttcgaatcacccactgaggatttg
cgcagtcactggccggccggcgagaccgaagcccacgaacgcctggaagccttcaccgac
gagcgcctggggggctaccacgaccgccgcgacttccccgccagcgacggcaccagccag
ctctcgccctacctcgccgccggagtcctctcgccccgccaatgcctgcacgcggcgctg
gccaacaaccacggcgagttcgaaaccggcaacagcggcgcggtcagctggatcaacgaa
ctgctctggcgcgagttctacaaacacatcctggtcggcttcccgcgcgtaagccggcac
cgcgcgttccgcgaggacaccgagaagctgaactggcgccacgaccgacaggacctggaa
gcctggcaacagggccgcaccggcttcccgatcatcgacgcggcgatgcgccaactgctg
gccaccggctggatgcacaaccgcctacgcatggtggtggcgatgttcctcaccaagaac
ctgctgatcgactggcgcgaaggcgagcgctggttcatgcgccacctgatcgacggcgac
ctggcggcgaacaacggcggctggcagtggagcgcctccaccggcaccgatgcggtgccc
tacttccgcctcttcaacccgatctctcaatccgagcgcttcgacccggacggccgcttc
atccgtcgctggctgccggagctggctggcgtggaaggccgggcgattcacgatccgtca
cggctggggctgttcggcgcggcaggttatccacagccgatggtcgatctttccgccacg
cgggagcgggcgctggaggcgttcaagggactctccgtccagccttga
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