Pseudomonas sp. W03: SD196_23260
Help
Entry
SD196_23260 CDS
T11012
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswo03021
]
SD196_23260 (nusA)
03009 Ribosome biogenesis [BR:
pswo03009
]
SD196_23260 (nusA)
Transcription machinery [BR:
pswo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SD196_23260 (nusA)
Ribosome biogenesis [BR:
pswo03009
]
Prokaryotic type
rRNA transcription factors
SD196_23260 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_KhpA-B
RNA_pol_A_CTD
KH_NusA_C
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
XOT21811
LinkDB
All DBs
Position
complement(5081715..5083196)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPPGVIFEALELALATATKKRFEDEVDLRVEINRANGNYETFR
RWTIVEDEDYSNPASELTVEDVQEEHPGMKAGEVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYREKVNEIISGTVKKVTRDNVIVDLGNNAEALLARDQIIPRETFRVGTR
VRALLKEIRSENRGPQLVLSRTAPEMLIELFRIEVPEIAEQLIDVMAAARDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMAPAEVAAIIV
DEDTHTMDIAVAEDNLAQAIGRSGQNVRLASQLTGWTLNVMTEADIQAKQQAETGDILQR
FVDELDVDEELAQVLVEEGFTTLEEIAYVPMEEMLSIDGFDEDIVNELRSRAKDRLLTKA
IATEEKLADAQPAEDLLSLDGMTKELAVDLALRGVTTREDLAEQSIDDLLDIDGMDEERA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaacgaaaagggtgtaccgcct
ggcgtgattttcgaagcgctggaactggccctggcgaccgcgaccaaaaagcgtttcgag
gacgaggttgacctgcgcgtggaaatcaaccgcgccaatggcaactacgagaccttccgt
cgctggaccatcgtcgaggacgaggactactccaatccggcatcggaactgaccgtcgaa
gacgtgcaggaagagcaccccggcatgaaggccggcgaggtcattgaagagaagatcgaa
tccatcgagttcggccgtatcgctgcgcagactgccaagcaggtcatcgtgcagaaggtt
cgcgaagccgagcgcgctcaggtggtcgatgcctaccgcgagaaggtcaacgagatcatt
tccggcaccgtcaagaaggtcacccgcgacaacgtgatcgtcgacctgggcaacaacgcc
gaagcgctgctggcccgcgaccagatcatcccgcgtgaaaccttccgcgtcggtacccgt
gtgcgtgccctgctcaaggaaatccgcagcgagaaccgtggtccgcaactggtcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgcatcgaagtaccggaaatcgccgaa
cagctgatcgacgtgatggccgccgcccgtgatccgggctcgcgcgccaagattgccgtc
cgctccaaggacaagcgtatcgacccgcagggcgcctgcatcggtatgcgtggttcccgt
gtccaggccgtttccggcgaattgggcggcgagcgtgtggacatcgtcctgtgggacgac
aaccccgcgcagttcgttatcaacgccatggctccggccgaagtggccgcgatcatcgtc
gacgaagatacccacaccatggatatcgccgtcgccgaggacaacctggcccaggccatt
ggccgcagtggccagaacgtacgtctggccagccagctcaccggctggaccctgaacgtg
atgaccgaggccgatatccaggccaagcagcaggctgagactggcgacatcctgcaacgt
ttcgtcgacgagctggatgtcgacgaggaactggcccaggtgctggtggaagaaggcttc
accaccctggaagaaatcgcctacgtaccgatggaagagatgctcagcatcgacggcttc
gacgaggacatcgtcaacgagctgcgctcgcgtgccaaggaccgcctgctgaccaaagcc
atcgccactgaagaaaaacttgccgacgcacaacctgccgaagacctgctcagcctcgat
ggcatgaccaaagagctggccgttgacctggcgctgcgtggcgtaaccacccgtgaagat
cttgccgagcaatccattgacgatctgctcgacatcgacggcatggacgaagagcgtgcc
ggcaagttgatcatggccgcccgggcccattggttcgagtaa
DBGET
integrated database retrieval system
