Pseudomonas sp. W03: SD196_23325
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Entry
SD196_23325 CDS
T11012
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00220
Arginine biosynthesis
pswo00240
Pyrimidine metabolism
pswo00250
Alanine, aspartate and glutamate metabolism
pswo01100
Metabolic pathways
pswo01110
Biosynthesis of secondary metabolites
pswo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SD196_23325 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SD196_23325 (carB)
00220 Arginine biosynthesis
SD196_23325 (carB)
Enzymes [BR:
pswo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SD196_23325 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
XOT21822
LinkDB
All DBs
Position
complement(5091595..5094816)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAM
ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEQFGVEMIGANA
DTIDKAEDRSRFDKAMRDIGLACPRSGIAHSMEEAYGVLEKVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIP
RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFDPKLDLHDPEA
ESILKRELTVPNADRIWYVADAFRAGKSIAEVFDLTRIDEWFLVQIEDLVKDEERVKTLG
LSAIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRQKLKVLPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVPI
IGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDQALELSKNIGYPMVVRPSYVLG
GRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDIDAVCDGETVVIGAIMQH
IEQAGVHSGDSACSLPPYSLPEHIQNEIREQVKKMALELGVVGLMNVQMAVQGEDIYVIE
VNPRASRTVPFVSKCIGESLAKVAARVMAGKSLAEVGFTEEVIPPYYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQLGASEILPNAGCAFISVRDDDKQQAVQVA
RDLIALGFEVVATAGTAKGIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGQAICEALKFGPEKTVRRLQDLHAGINA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtacagacatcaagagcatcctgatcctcggcgccggcccgatcgtcatc
ggccaggcctgcgagttcgactactccggcgcacaggcctgcaaggccctgaaggaagaa
ggcttccgtgtcatcctggtgaactccaacccggccaccatcatgaccgatccggccatg
gccgacgccacctacatcgagccgatcaagtggcagaccgtcgccaagatcatcgagaag
gagcgccctgacgcgctgctgccgaccatgggcggccagaccgctctgaactgcgccctg
gacctggagcgccatggcgtgctcgagcagttcggcgtggaaatgatcggcgccaacgcc
gacaccatcgacaaggccgaagaccgctcgcgcttcgacaaggccatgcgtgacatcggc
ctggcctgcccgcgctcgggcatcgcccatagcatggaagaagcctatggcgtgctggag
aaggtcggcttcccctgcatcatccgtccgtccttcaccatgggcggcaccggtggcggc
atcgcctacaaccgcgaagagttcgaagaaatctgcgcccgtggtctggacctgtcgccg
accaatgagctgctgatcgacgaatcgctgatcggctggaaggaatacgagatggaggtt
gtccgcgacaagaaggacaactgcatcatcgtctgctccatcgagaacttcgacccgatg
ggcgtgcacaccggtgactccatcaccgtggcgccggcccagaccctgaccgacaaggaa
taccagatcatgcgcaacgcctccctggcggtgctgcgtgagatcggcgtggaaaccggc
ggctcgaacgtgcagttcggcatctgcccgaacaccggccgcatggtcgtgatcgagatg
aacccgcgtgtatcccgttcctcggcgctggcttccaaggccactggcttcccgatcgcc
aagatcgccgccaagctggccgtcggctacacccttgacgagctgcagaacgacatcacc
ggcggccgcaccccggcgtccttcgagccggcgatcgactacgtcgtcaccaagatcccg
cgtttcgccttcgagaaattcccgaaagccgacgcccgcctgaccacccagatgaagtcc
gtgggtgaagtcatggccatcggccgcaccttccaggaatccgtgcagaaagccctgcgc
ggcctggaagtcggcgccaccggcttcgatccgaagctggacctgcacgatccggaagct
gagagcatcctcaagcgcgagctgaccgtgcccaacgccgaccgcatctggtacgtcgcc
gacgccttccgcgccggcaagagcatcgccgaagtcttcgacctgacccgcatcgacgag
tggttcctggtgcagatcgaagacctggtcaaggacgaagagcgcgtgaagaccctgggt
ctgtccgccatcgaccgcgacctgatgtacaagctcaagcgcaagggcttctccgacgcc
cgtctggccaagctgctcggcgtgaccgagaagaacctgcgcagccatcgccagaagctc
aaggtgctgccggtgtacaaacgcgtggatacctgcgccgccgaatttgccaccgacacc
gcctacatgtactcgacctacgaggaagagtgcgaagccaatccgtcgactcgcgacaag
atcatgatcctgggcggcggtccgaaccgcatcggccagggtatcgagttcgactactgc
tgcgtacacgccgcgctggccatgcgtgaagacggttacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacgtccgaccgtctgtacttcgagccggta
accctggaagacgtgctggaaatcgtccgcgtcgagcagcccaagggtgtcatcgtgcag
tacggcggccagactccgctgaaactctgccgcgccctggaagaggccggtgtgccgatc
atcggcaccagcccggacgccatcgaccgcgctgaagaccgcgagcgcttccagcagatg
gtccagcgcctgaacctgcgccagccggctaacgccaccgcgcgcagcgaagaccaggcc
ctggaactgtcgaagaacatcggctacccgatggtggtgcgcccgtcctacgtgctgggc
ggccgcgcgatggaaatcgtctaccaggaagaagagctcaagcgctacatgcgcgaagcc
gtgaaggtttccaacgacagcccggtgctgctggatcgcttcctgaactgcgccatcgaa
gtcgacatcgatgcggtgtgcgacggcgagaccgtggtgatcggcgcgatcatgcagcat
atcgaacaggctggcgtgcactccggtgactccgcctgctcgctgccgccgtactcgctg
cccgagcacatccagaacgagatccgcgagcaggtcaagaagatggccctggaactcggc
gtggtcggtctgatgaacgtgcagatggccgtacagggcgaggatatctacgtgatcgag
gtgaacccgcgcgcgtcccgtaccgtgccgttcgtctccaagtgcatcggcgaatccctg
gccaaggtcgcggcccgcgtcatggctggcaagtccctggccgaagtcggcttcaccgaa
gaggtgatcccgccgtactatagcgtcaaggaagcggtgttcccgttcgccaagttcccc
ggcgtcgacccgatcctcggcccagagatgaaatccactggcgaggtgatgggtgtcggc
gacagcttcggtgaggcattcgccaaggcccagctgggtgccagcgaaatcctgccgaat
gccggttgtgccttcatcagcgtccgcgatgacgacaagcagcaggccgtccaggtcgct
cgcgatctgattgccctgggcttcgaggttgtcgcgactgccggtaccgccaagggcatc
gaagccgccggtctgccggtgcgccgcgtgaacaaggtgaccgaaggccgtccgcacgtg
gtcgacatgatcaagaatgacgaagtcactctgatcatcaacaccaccgaaggtcgccag
tccatcgctgactcgtactccatccgtcgtaacgccctgcagcacaagatctactgcacc
accaccatcgcggcgggtcaggcgatctgtgaggcgctcaagttcggtcccgagaagacc
gttcgccgactgcaggatctccatgcaggaatcaacgcatga
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