Pseudomonas sp. W03: SD196_23410
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Entry
SD196_23410 CDS
T11012
Name
(GenBank) response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02020
Two-component system
pswo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD196_23410
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_23410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pswo02022
]
SD196_23410
Two-component system [BR:
pswo02022
]
OmpR family
QseC-QseB (quorum sensing)
SD196_23410
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
XOT21838
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Position
5113478..5114155
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AA seq
225 aa
AA seq
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MRILLAEDDQLLGDGIRAGLGLEGDTVDWVQDGQAADQALQTDEFDLLVLDLGLPRKDGL
EVLRSLRRRGDLTPVLILTARDKVADRVAGLDAGADDYLTKPFDLDELLARVRALTRRRT
GRAAPLLQHGELMLDPATHQVSLCGTPVELAPREYALLRLLLEQRGKVLSRTRLVEALYG
WDGDLESNAIEVHIHHLRRKLGNGLIRTVRGIGYGIDRPDNPSSP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctgctggcggaagatgaccaactgctgggtgacggcattcgcgccgggctc
ggcctggaaggcgacaccgtggattgggtccaggacggccaggctgccgaccaggcgctg
cagaccgacgagttcgacctgctggtcctcgacctcggcctgccgcgcaaggacggcctg
gaagtactgcgcagcttgcgccggcgcggcgacctgacaccggtgctgattctcaccgcc
cgcgacaaggtcgccgaccgcgtggccggcctcgacgccggcgccgatgattacctgacc
aaacccttcgacctcgacgaactgctcgcccgcgtccgcgccctcacccgccgccgcacc
ggccgtgccgcgccgctgctgcagcacggcgaactgatgctggacccggctacccaccag
gtcagcctctgcggcacgccggtggaactggccccgcgcgaatacgcactgttgcgcctg
ctgctggaacagcgcggcaaggtgctgtcccgcacccgcctggtggaagccctgtacggc
tgggacggcgacctggagagcaacgccatcgaagtccacatccaccatctgcgtcgcaag
ctcggcaatggcctgatccgcaccgtgcggggtatcggctacggcatcgaccgccccgac
aatccgtcctcgccgtga
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