Pseudomonas sp. W03: SD196_23730
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Entry
SD196_23730 CDS
T11012
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswo03000
]
SD196_23730
03036 Chromosome and associated proteins [BR:
pswo03036
]
SD196_23730
Transcription factors [BR:
pswo03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SD196_23730
Chromosome and associated proteins [BR:
pswo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SD196_23730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
HTH_20
MarR_2
HVO_A0114
HTH_IclR
HTH_1
NirdL-like_HTH
HTH_5
Fe_dep_repress
HTH_Tnp_ISL3
DUF7343
HTH_23
HTH_28
TrmB
HTH_29
HTH_11
HTH_Crp_2
WHD_DprA
HTH_Cmi2_C
HTH_38
Rrf2
LexA_DNA_bind
HTH_Mga
HTH_PafC
HTH_26
HTH_47
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
XOT21896
LinkDB
All DBs
Position
5180830..5181276
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AA seq
148 aa
AA seq
DB search
MDRYDRALLAALLEDGRMSFAELARRINLSPPAVADRVARLEADGVITGYHASVDLSKMG
RSIQCLIEMRLNDHRSKTMLDPLLEIPQIIDCYRITGEACVMLKVAVSCTRELEELIDRL
AQFGTSKTSLVLSTPFSGRVHPAMLQDG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggacagatacgatcgcgccctgctcgccgccctgctggaagacggccgcatgtccttc
gcggagctcgcccggcgcatcaacctatcccctcccgcggtggccgatcgcgtcgcccgc
ctggaagccgacggggtgatcaccggctaccacgccagcgtagacctgtcgaagatgggc
cgctcgatccagtgcctgatcgagatgcgtctgaacgaccatcgcagcaagaccatgctc
gacccgttgctggaaatcccgcagatcatcgattgctaccgcatcaccggcgaggcctgc
gtgatgctcaaggtggcggtgagctgtacccgggagctggaagaactgatcgaccgcctg
gcccagttcggcaccagcaagacctcgctggtgctgtccacacccttctccgggcgcgtg
catccggcgatgttgcaggacggttga
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