Pseudomonas sp. W03: SD196_24580
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Entry
SD196_24580 CDS
T11012
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_24580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_24580
Transporters [BR:
pswo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SD196_24580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
XOT22057
LinkDB
All DBs
Position
complement(5362283..5363341)
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AA seq
352 aa
AA seq
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MTFRKNPFRMSRMHSLLLALGLCCATAQASENMVVVGYGGAGQKAQDAAFFQPFSKQSGV
GVTQSEYNGEMARIKVMADTGHADWDVVQIEGPDLARGCDEGLFVPLDWQQIGGKDQLIP
NAAKDCGSAALVWGVAIAYDADKLKPAPQSWTDFWDVKKFPGKRGLRKRAIYNLEFALMA
DGVKPADVYKELGTKAGVDRAFAKLDQIKPYVQWWEAGAQPAQWLAAGDVVMTTTYTGRI
ADAFKGGRNLQLVWPGSLYGMDYWAIIKGSQHADAAKRFIAFANQSDAQVDYVKHIPYGP
TNKQAAERLPSDLAGWVPTSPQNLPQGLAMDDEFWVDHGEELEERFNAWAAQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactttccgcaagaaccctttccgcatgagcaggatgcattcgctgctgctcgccctc
ggactctgctgcgctaccgcccaggccagcgagaacatggtggtggtcggctacggcggc
gccggccagaaggcccaggatgcggccttcttccagcccttcagcaagcagtccggggtc
ggggtgacccagagcgagtacaacggcgaaatggcccgtatcaaggtgatggccgacacc
ggccatgccgactgggacgtggtgcagatcgagggcccggacctggcccgcggctgtgac
gaggggctgttcgtgccgctggactggcagcagatcggcggcaaggatcaactgatcccc
aacgccgccaaggactgcggttccgccgcgctggtctggggcgtggcgatcgcctatgac
gccgacaagctcaagccggcgccgcaatcctggaccgatttctgggacgtgaagaaattc
cccggcaagcgcggcctgcgcaaacgcgccatctacaacctggagttcgccctgatggcg
gacggcgtgaaaccggccgacgtgtacaaggagctgggcaccaaggccggcgtcgatcgc
gcctttgccaagctcgaccagatcaagccctacgtgcagtggtgggaagccggcgcgcag
cccgcgcagtggctggccgccggtgacgtggtgatgaccaccacctacaccgggcgcatc
gccgatgccttcaagggtggacgcaacctgcagctggtctggccaggcagcctgtacggc
atggattactgggcgatcatcaagggctcgcagcacgccgatgcggccaagcgtttcatc
gcctttgccaatcagtccgatgcccaggtggattatgtgaagcacatcccctatggtccg
accaacaagcaggccgccgagcggctgccgtcggatctggccggctgggtgccgacctcg
ccgcagaacctgccccaggggctggcgatggatgatgagttctgggtcgaccacggcgaa
gagctggaagagcgcttcaacgcctgggccgcccagtga
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