Pseudomonas sp. W03: SD196_24655
Help
Entry
SD196_24655 CDS
T11012
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD196_24655 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_24655 (msbA)
Enzymes [BR:
pswo01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SD196_24655 (msbA)
Transporters [BR:
pswo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SD196_24655 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_29
NB-ARC
nSTAND1
AAA_30
MMR_HSR1
nSTAND3
AAA_15
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XOT22072
LinkDB
All DBs
Position
complement(5380110..5381936)
Genome browser
AA seq
608 aa
AA seq
DB search
MAGNETQAPSSLKIYFRLLSYVRPYIGMFLLSIVGFLIFAATQPMLAGILKYFVDGLAHP
DAKLFPNAPLAWLRDLQLLYAVPLLVVLIAVWQGVGSFLGNYFIAKVSLGLVQDLRIALF
NNLLTLPNRYFDSHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVVFLFLSLLYMNW
KLTLVMLAILPVIALMVTSASRKFRKQSKKIQVAMGDVTHVSSETIQGYRVVRSFGGEAY
ERQRFQNVTDENTSKNLRMNKTSAIYTPMLQLVIYSAMAVLLYLVLLLRGDATVGDLVAY
ISMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEQPEVDHGTVERERVNGRLEVKNL
SFTYPGTEKQVLKDLNFSVEPGQMVALVGRSGSGKSTLANLIPRFYDHSDGQILLDGVDV
EDYKLTNLRKHISLVTQQVNLFNDSVLNNIAYGDLASKPREAVEKAADDAFAREFIDRLP
EGFETEVGENGVMLSGGQRQRLAIARALLKDAPVLILDEATSALDTESERHIQAALEKVM
EGRTTLVIAHRLSTIEAADLILVMDQGHIVERGSHDQLIAQNGYYARLHARQFADEPAEA
GSNAEQSV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaacgaaacccaggctccctccagcctgaagatttatttccgactgctttcc
tatgtacgcccgtacatcgggatgttcctgctcagcatcgtcggcttcctgatcttcgcc
gctacccagccaatgctggcgggcatcctcaagtacttcgtcgacggcctggcccatccg
gacgccaagctgttccccaacgcgccgctggcctggttgcgtgacctgcaactgctgtat
gcggtgccgctgctggtggtactgatcgcggtctggcagggtgtcggctcgttcctgggc
aactacttcatcgccaaggtctccctgggcttggtgcaggacctgcgcatcgcactgttc
aacaatctgctgacgctgcccaaccgctatttcgacagccacaactccgggcacctgatc
tcgcgcatcaccttcaacgtgaccatggtcaccggcgctgccaccgacgcgatcaaggta
gtgatccgcgaaggcatgaccgtggtcttcctgttcctctcgctgctgtacatgaactgg
aaactgaccctggtgatgctcgcgatcctgccggtcatcgcattgatggtgaccagcgcc
agccgcaagttccgcaagcagagcaagaagatccaggtggccatgggcgacgtgacccat
gtgtcctccgagaccatccagggttaccgcgtggttcgcagtttcggtggcgaggcttat
gagcgccagcgcttccagaacgtgactgacgagaacaccagcaagaacctgcgcatgaac
aagacctcggcgatctacacgccgatgctgcaactggtgatctacagcgccatggccgtg
ctgctgtacctggtgctgctgctgcgcggcgacgctactgtcggcgacctggtggcctac
atctccatggccggcctgctgcccaaaccgatccgccagctctccgaagtcagctcgacc
atccagaagggcgtggccggcgccgagagcatcttcgagcagctcgacgagcaacccgaa
gtggatcatggcaccgtcgagcgcgagcgcgtgaacggccgcctggaagtgaagaacctc
agcttcacctacccgggcaccgagaagcaggtgctcaaggacctgaacttcagcgtcgag
ccgggccagatggtggcgctggtcggccgctccggcagcggcaagtcgaccctggccaac
ctgattccgcgcttctacgaccacagcgacgggcagatcctgctcgatggcgtggacgtc
gaagactacaagctgaccaacctgcgcaagcacatctcgctggtgacccagcaggtcaac
ctgttcaatgacagcgtgctgaacaacatcgcctacggcgacctggccagcaagccgcgc
gaggcggtggaaaaggccgccgacgatgccttcgcccgcgagttcatcgatcgtctgcct
gaaggattcgagaccgaagtcggcgagaacggcgtgatgctctccggcggccagcgccag
cgcctggcgattgcccgtgcgttgctcaaggatgcgccggtgctgatcctcgacgaggcc
acctcggcgctggacaccgagtccgagcggcacatccaggccgccctggagaaggtcatg
gaaggccgcaccaccctggtgatcgcccaccgcctgagcaccatcgaggcggcggacctg
atcctggtgatggaccagggtcacatcgtcgagcgcggcagccacgaccagctgatcgcg
cagaatggctactacgcccgtctgcatgcgcgacagtttgccgacgagccggccgaggca
ggttccaacgccgagcagtcggtttga
DBGET
integrated database retrieval system
