Pseudomonas sp. W03: SD196_26720
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Entry
SD196_26720 CDS
T11012
Name
(GenBank) PLP-dependent aminotransferase family protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pswo Pseudomonas sp. W03
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswo03000
]
SD196_26720
Transcription factors [BR:
pswo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SD196_26720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_11
Aminotran_5
Rrf2
HTH_36
HTH_24
HTH_IclR
MarR
HTH_6
HTH_50
Motif
Other DBs
NCBI-ProteinID:
XOT22459
LinkDB
All DBs
Position
complement(5860243..5861697)
Genome browser
AA seq
484 aa
AA seq
DB search
MSVPLPFNPSGIRLDPARPLGVQLFQALRERILDGRLAARSRLPASRDLAASLGVSRNTV
VRAYEQLYAEGYIEGRTGDGTYVADRVQPSMDAVRGEARSPDAPSLERLARHHLPLPPSG
APRAFRVGVPAFDLFPFDTWARLQARFWRDPPLDCLGYGDPAGEQRLRELVAAYLRSTRG
LHCDAQQIIITSGAQQGIALCAQVLLAEGDGAAIENPGYRAAGHAFATAGARLHGVPVDA
DGLCTSHLERLSDCRLVYVTPSHQYPTGVTLSLARRLELLEWAERRGGWIVEDDYDGEYR
YSGTPLMPLAALDRHDRVLYVGTFCKIAFPALRLGYLVVPPALAQAFARRRALDVRHSEV
GTQRVMADFIAEGHFQRHVRRMRRAARSRRDALLRGWPEVAGCAPMPTVEAGLHLCVRVD
SRERELELVQRALAVGVEVNALSDYWLPESTEPEDQRAGLVLGFAAVPEARIAEALKALR
KAWQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcccgctgcccttcaacccttccggcattcgcctcgatcccgcgcgtccgctg
ggtgtgcaactgttccaggcgctacgcgagcgcatcctcgacggccgcctggcggcgcgc
tcgcgattgccggcgagccgcgacctggcggcgtccctgggcgtttcgcgcaataccgtg
gtgcgcgcctacgagcagctttatgccgagggttacatcgaagggcgcaccggcgacggc
acctatgtggccgatcgggttcagccatcgatggacgccgtgcgcggcgaggcgcgcagt
ccggatgcgccgtcactcgaacgattggcgcggcaccacctgccgctgccgcccagcggt
gcgccgcgcgccttccgcgtcggcgtgccggctttcgacctgttccccttcgacacctgg
gcacggttgcaggcgcgcttctggcgcgacccgccgctggactgcctgggctacggcgac
ccggcgggcgagcagcgcctgcgcgagctggtcgccgcctacctgcgcagcacacgcggc
ctgcattgcgacgcccagcagatcatcatcaccagcggcgcccagcagggcatcgcgctg
tgcgcccaggtgctgctggccgaaggtgacggcgcggccatcgagaatcccggctaccgc
gccgctggccacgccttcgccacggcgggcgcacggctgcacggcgtgccggtggatgcc
gacggcctgtgcacttcgcacctggaacggctgtcggactgccggctggtgtatgtcaca
ccctcgcaccagtacccgaccggggtgaccctgtccctggcgcggcgcctggagctgctg
gaatgggccgagcgccgcggtggctggatagtcgaggatgattacgacggcgagtaccgc
tacagcggaacgccattgatgccgctggctgcgctggatcgccatgaccgggtgctctac
gtcggcaccttctgcaagatcgccttccccgcgctgcgcctgggctacctcgtggtccct
ccggcgctggcgcaggccttcgcccggcgtcgcgcgctggatgtgcggcactcggaggtc
ggtacccagcgggtgatggccgacttcatcgccgaagggcatttccagcgtcacgtccgc
cgcatgcgccgggcggcgcgcagtcggcgcgatgcgttgctgcgcggctggccggaggtc
gccggctgcgctccgatgccgacggtggaagcggggctgcacctgtgcgtgcgggtcgac
agtcgcgagcgcgaactcgaactggtgcagcgtgcgctggccgtgggtgtggaggtgaat
gcgctgagcgactactggctgccggagtccaccgagccggaagatcagcgcgccgggctg
gtcctgggcttcgcggcggtgcccgaggcgcggatcgccgaagccttgaaggcgttgcgc
aaggcgtggcagtag
DBGET
integrated database retrieval system
