KEGG   Pseudomonas sp. W03: SD196_26855
Entry
SD196_26855       CDS       T11012                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pswo  Pseudomonas sp. W03
Pathway
pswo00260  Glycine, serine and threonine metabolism
pswo00460  Cyanoamino acid metabolism
pswo00630  Glyoxylate and dicarboxylate metabolism
pswo00670  One carbon pool by folate
pswo00680  Methane metabolism
pswo01100  Metabolic pathways
pswo01110  Biosynthesis of secondary metabolites
pswo01120  Microbial metabolism in diverse environments
pswo01200  Carbon metabolism
pswo01230  Biosynthesis of amino acids
pswo01240  Biosynthesis of cofactors
pswo04981  Folate transport and metabolism
Module
pswo_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pswo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SD196_26855 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    SD196_26855 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SD196_26855 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    SD196_26855 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SD196_26855 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    SD196_26855 (glyA)
Enzymes [BR:pswo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     SD196_26855 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: XOT22484
LinkDB
Position
5893286..5894539
AA seq 417 aa
MFSKHDQIQGYDDELLAAMDAEEARQEDHLELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANAAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAIQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARSNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIKNAQAMAS
VFIDRGYDVVSGGTDNHLMLISLVKQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTS
GIRIGTPAVTTRGLQESQCRELAGWICDVLDHLGDADVEAKVATQVAGLCADYPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcacgaccagatccagggctatgacgacgaactgctcgcggcgatggat
gccgaggaggctcgccaggaggaccacctcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccagggcagcgggctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggctgcgagcacgtcgacaaggtcgagcagctggccatcgac
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggctcctcg
gccaacgccgctgtttatctcgccctgctcaacgccggtgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtctcctcctccggcaagctgtac
aacgccatccagtacggcctggacaccgccaccggcctgatcgactacgacgaagtcgag
cgcctggccgtggagcacaagccgaagatgatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgcttccgcgccatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgccgccggcctgtacccgaacccgctgccctac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaggtccaacgaagagatcgagaagaagctcaactccgccgtcttccctggcgcc
cagggtggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagcgctg
gaacccggcttcaaggactaccaggcccaggtgatcaagaacgcccaggccatggcctcg
gtgttcatcgaccgcggctacgacgtggtctccggcggcaccgacaaccacctgatgctg
atcagcctggtgaagcagggcctgaccggcaaggaagcggacgcagcattgggccgcgtc
ggcatcaccgtgaacaagaacgccgtgccgaacgacccgcagagcccgttcgtcacctcc
ggcatccgcatcggcaccccggcggtcaccacccgtggcctgcaggaaagccagtgccgc
gaactggccggctggatctgcgacgtgctggaccacctgggcgacgccgacgtcgaggcc
aaggtggccacccaggtcgccggcctctgcgcggactatccggtctaccgttga

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