Pseudomonas sp. W03: SD196_27075
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Entry
SD196_27075 CDS
T11012
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo03420
Nucleotide excision repair
pswo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD196_27075 (uvrD)
03430 Mismatch repair
SD196_27075 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswo03400
]
SD196_27075 (uvrD)
Enzymes [BR:
pswo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD196_27075 (uvrD)
DNA repair and recombination proteins [BR:
pswo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD196_27075 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SD196_27075 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
XOT22527
LinkDB
All DBs
Position
5944635..5946815
Genome browser
AA seq
726 aa
AA seq
DB search
MNDDLSLLLNSLNDPQRQAVAAPLGRQRVLAGAGSGKTRVLVHRIAWLIQVERASPHSIL
AVTFTNKAAAEMRARIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEANLPENFQILDSDD
QLRLVKRVVRELGLDEQRWPPRQAQWFINGQKDEGNRPQNIQASGDLYLSTMVSIYQAYE
EACARAGVVDFAELLLRSLDLWRNRPSLLEHYQRRFRHILVDEFQDTNAVQYAWLRFLAK
GGESLMVVGDDDQSIYGWRGAKIENIQHFADDFAGTEDIRLEQNYRSTATILKAANALIA
NNSGRLGKELWTDGVDGDPITLYAGFNEHDEARYIVETIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNALAYLRLIRLRDDDAALERVINVPPRG
IGEKTVEAIRNAARLNGTSMWRAINDVIAAKAVAGRAASALNGFLEAVDLLALKVEGLPL
HQMTQIVIEQSGLITYHKEEKGEKGQARVENLEELVSAARAFENPDDEDIPPLVAFLDHT
ALESGDTQADAFEDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQRLVMTYAETRRLYGSETYNKVSRFVREIPPSLIQEVRLSNSVSRPLSGGQ
RSGNLFSGASVPDTPFSLGQSVRHPLFGDGVILNFEGSGAQARVQVNFDSEGSKWLMMGY
AKLEAI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgacctctccctcctgctcaactccctcaatgacccgcagcgccaggccgtg
gccgcgccgctggggcgccagcgcgtgctcgctggcgccgggtccggcaagacccgcgtg
ctggtgcaccgcatcgcctggctgatccaggtggagcgcgcctcgccgcacagcatcctg
gccgtgaccttcaccaacaaggccgccgccgagatgcgcgcgcggatcgagcagctgctg
gggatcaacccggccggcatgtgggtcggcaccttccacggcctcgcgcaccgcctgctg
cgcgcgcactggcaggaggccaacctgccggagaacttccagatcctcgacagcgacgac
cagctgcgcctggtcaagcgcgtggtccgcgagctggggctggacgagcagcggtggccg
ccgcgccaggcgcagtggttcatcaacgggcagaaggacgagggcaaccgcccgcagaac
atccaggccagcggcgacctctacctgtcgaccatggtcagcatctaccaggcctacgaa
gaagcctgcgcccgtgccggcgtggtggacttcgccgagctgctgctgcgctcgctggac
ctctggcgcaaccgcccgagcctgctggagcactaccagcggcgcttccgccacatcctg
gtggatgagttccaggacaccaacgccgtgcagtacgcctggctgcgcttcctcgccaag
ggcggcgagagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgaagatcgagaacatccaacacttcgccgatgacttcgccggcaccgaggacatccgc
ctggagcagaactaccgctccacggcgaccatcctgaaggccgccaacgccctgatcgcc
aacaacagcgggcgcctgggcaaggaactgtggaccgacggcgtcgacggcgacccgatc
accctctacgccggcttcaacgagcacgacgaggcgcgctacatcgtcgaaacgatcgaa
gacgccctgcgcaaggacggtctcaagcgcagcgaaatcgccattctctaccgctccaac
gcccagtcccgcgtgctggaagaggcgctgctgcgggagaagatcccctaccgcatctac
ggcggccagcgcttcttcgaacgcgccgagatcaagaacgccctggcctacctgcgcctg
atccgcctgcgcgacgacgacgccgcgctggagcgggtgattaacgtgccgccgcgcggc
atcggcgagaagaccgtcgaggcgatccgcaacgccgcgcgcctgaacggcacctccatg
tggcgcgcgatcaacgacgtgatcgccgccaaggccgtggccggccgcgccgccagtgcg
ttgaacggcttcctcgaagccgtcgacctgctggcgctgaaagtggaaggtctgccgctg
caccagatgacccagatcgtcatcgagcagtccggcctgatcacctaccacaaggaagag
aagggcgagaaaggccaggcccgggtggaaaacctggaagaactggtcagcgccgcccgc
gccttcgagaacccggacgacgaggacatcccgccgctggtggccttcctcgaccacacc
gcgctggagtccggcgacacccaggccgacgccttcgaggacagcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttcccgctggtgttcctcgccggcatggaagagggc
ctgttcccgcacaagatgagcctggaagaacccgggcgtctggaagaagaacgccgtctg
gcctatgtgggcatcacccgcgccatgcagcgcctggtcatgacctacgcggaaacccgc
cgtttgtacggcagcgagacctacaacaaggtctcgcgcttcgtccgcgaaatcccgccg
agcctgatccaggaagtgcgcctatccaactcggtgagccgtccgctctcgggcggccag
cgcagtggcaacctgttcagcggcgccagcgtgccggacaccccgttcagcctcggccag
tccgtgcgccacccgctgttcggcgacggcgtgatcctcaacttcgaaggctccggcgcc
caggcgcgggtgcaggtgaacttcgacagcgagggcagcaagtggctgatgatgggctac
gcgaagctggaagcgatctga
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