Pseudomonas sp. W03: SD196_27265
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Entry
SD196_27265 CDS
T11012
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pswo Pseudomonas sp. W03
Pathway
pswo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD196_27265 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_27265 (choW)
Transporters [BR:
pswo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
SD196_27265 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
TraP
Motif
Other DBs
NCBI-ProteinID:
XOT22563
LinkDB
All DBs
Position
complement(5991766..5992605)
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AA seq
279 aa
AA seq
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MFLTDHKLPLGEHIAAFVDWLTQHGAAFFDKISDTLEFLIHAVTNSLLWFNPLALIALMV
ILVFYIQRSWGLAAFALASLLLILNLGYWQETMETLAQVIFATVVCIAIGVPLGILAAHK
PWFYTALRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVIFAIAAPIRLTCLGIQDV
PAELMDAGKAFGCSRWQLLTRIELPHAMPSIGAGITQCIMLSLSMVVIAALVGADGLGKP
VVNALNTADISLGFEAGLAIVLLAILLDRVCKQRSLRGR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgactgaccacaagctcccgctgggcgaacacatcgccgccttcgtcgattgg
ctcacccagcatggcgccgcgtttttcgacaagatttccgacacccttgagttcctgatt
cacgctgtcaccaacagcctgctctggttcaacccgctggccctgatcgcgctaatggtc
atcctggtgttctacatccagcgcagctgggggctggcggcgttcgcgctggcctcgctg
ctgctgatcctcaacctggggtactggcaggagaccatggagaccctggcgcaggtgatc
ttcgccacggtcgtgtgtatcgccatcggggtgccgctgggcatcctggcggcgcacaag
ccctggttctacaccgccctgcggcccttgctggacctgatgcagacggtacccacgttc
gtgtacctgatcccgaccctgaccctgttcggcctgggtgtggtgccgggcctgatttcc
actgtgatcttcgccatcgctgcgcccatccgcctgacctgcctgggtatccaggacgtg
ccggcggagctgatggacgccggcaaggccttcggttgctcgcgctggcagctgctgacc
cgtatcgaactgccccacgccatgcccagcatcggcgccgggatcacgcaatgcatcatg
ttgtcgctgtcgatggtggttatcgccgcgctggtgggtgccgacggcctgggtaaaccc
gtggtcaacgcgctcaacacggcggacatttccctcggcttcgaggccggtctggccatc
gtcctgctcgccatcctgctcgaccgggtgtgcaagcaacgttcgctgcgggggaggtaa
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