Paenibacillus swuensis: SY83_14030
Help
Entry
SY83_14030 CDS
T04884
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pswu
Paenibacillus swuensis
Pathway
pswu03410
Base excision repair
pswu03430
Mismatch repair
pswu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SY83_14030
03430 Mismatch repair
SY83_14030
03440 Homologous recombination
SY83_14030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswu03400
]
SY83_14030
DNA repair and recombination proteins [BR:
pswu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SY83_14030
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SY83_14030
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SY83_14030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANE47197
UniProt:
A0A172TK60
LinkDB
All DBs
Position
3182322..3184751
Genome browser
AA seq
809 aa
AA seq
DB search
MLQAKAKWNITEYDEALIERLSAEWGVQPFLLKLLHARGITTAEEASRFLQGDEGEIHDP
FLLKGMREATARIRKALEEGEYIRVYGDYDADGVSSTSLLVHLLRGLGAKFDHYIPHRAK
EGYGLNIAAIEAAKAEGVSLIVTVDTGISAVEQIAFANSVQIDVIVTDHHEPPDILPQAL
ALINPKLTDCPYPYKSLAGVGVAFKLAHALLGRFPEELLEMAVIGTVADLMPLTGENRAI
VRRGMKRIRNSDNPGIKALLDVAGVELSKVSAGNIAFAVAPRINAAGRLQHANLAVHLLT
TLDTSEAELLSHELDLLNKERQAIVEDIAGQALEQVTAQGLEQDKVLVVAGESWNVGVIG
IVASKLLDRHYRPAIVLGVDPETGMCKGSARSIPGFDMYKALSSVSELFAHYGGHQAAAG
MTLHRDQLPQLRQRLNEMAEHWLMADDLLPKLSADMVCGLSEVTLETIQLAESLAPFGMS
NPAPRFVLEGLQIREIRTMGKDKQHIKLTLTDPEGKAKPLEALAFNRPQLVHALSSTSRL
DLLAELSINEWNGTRKPQIMIQDVRVNQLQIFDWRGIPTPQDKLEALADEVRACAVLASR
PAAERLAADGKLGACGLWSWEPDGTALPVNDAAKARPLAFVHNVVLYSLPECLTRIHKLL
INGQTMERIYAVFAADGQRNQTLTLPSREDFKGMYAILKQREQWNIRSGELHTHLRRRSG
ISEDAASFILQVFEELSFIEKDGHSIRCTSAPSKQDLTTAQAYQRRVKQLEAEEIFVYSS
AQELTDWFLKQPGFESSEPQQPNLLEEIV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagctaaagccaaatggaacataacagaatatgacgaggcgttgatcgagagg
ctgtccgccgaatggggcgtacagcctttcctgttgaagttactgcatgcgcgaggcatc
accacggccgaggaggcaagccgttttctgcagggagacgagggggaaattcacgatccg
tttctgttgaaagggatgcgggaagctacagcaagaatccgtaaggcactggaagaggga
gaatatatccgggtttacggcgattatgatgcggacggtgtcagcagcacttcccttctt
gttcatctcttgcgggggctgggagccaaattcgatcattatattccccatcgagccaaa
gaaggctacggattaaacatagccgcaatcgaagccgcaaaggctgagggcgtatccttg
atcgttactgtggacaccggcattagtgccgtggagcaaattgcgttcgcaaacagcgtt
caaatcgacgtaatcgttacagaccaccatgaaccgcccgacattcttccgcaagctttg
gctcttattaatccaaagctaacggactgtccctatccctacaagagcttagccggcgtc
ggagtagccttcaagctcgctcatgcgctgcttggccgctttccggaagaacttcttgag
atggctgtcattggaacggtcgcggaccttatgccgttgaccggggaaaaccgggcgatc
gtcagacgaggaatgaaacgaattcgtaacagcgataatccgggaattaaagcgttactg
gatgttgccggtgtggagttgtcgaaagtttcagccggtaatatcgcatttgctgtcgct
ccccgaattaatgccgcaggcaggcttcagcacgccaacttagccgtgcatctgctgacc
accttggatacgtccgaagcagaactgctgagtcatgagttggatttactgaacaaggaa
cgacaagccatcgttgaggacatcgcgggtcaagctttagagcaggtgacagcgcaagga
ctggagcaggataaagtgctcgttgtggcgggcgagagctggaatgtgggtgtcatcgga
atcgttgcctccaagcttctggaccgacattaccgcccggccattgttctcggtgtggat
ccggaaacgggcatgtgcaagggttcagcccgatctattccgggctttgatatgtacaag
gccttgtcatctgtcagcgagctgtttgctcattatggcggacatcaggcagccgccggc
atgacactgcatagagatcaactgccgcagcttcggcagaggttaaatgaaatggccgag
cattggttaatggcggatgatctgttacctaaactctcagctgatatggtgtgcgggttg
tccgaggttacattggaaaccattcaactggctgaatcacttgccccattcggcatgtcg
aatcctgcgccacggtttgtgttggaaggtttacagattcgggagatccgtacgatgggg
aaggataaacagcatattaagcttacattgacggatccggaaggaaaggctaagccgctg
gaggcgttggccttcaaccggccgcagctggttcatgcgctgtcttccacttcgcgtttg
gatttactggcggagttgtctattaacgaatggaacggtacacgtaaaccgcaaatcatg
atacaggatgttcgtgtcaatcaactgcaaatttttgattggcgagggattccaacgcct
caggacaagcttgaagctttagcagatgaggttcgcgcatgcgcggttctggccagcagg
ccagcggcggaacgtctcgcggccgacggcaagctgggcgcttgcggattatggtcctgg
gaaccggacggcaccgccttgcccgtgaatgatgcagcgaaggcgcgtcccttggcgttc
gtgcacaacgtcgttctatatagtttgccggaatgtttaacacggatacacaaattgttg
ataaacgggcaaactatggaacggatctatgctgtatttgccgcggacggccaacgcaat
caaacgttgacgctgccatcccgcgaggattttaaaggtatgtacgcgatactgaagcaa
cgtgagcaatggaatatccgctccggtgagttgcacacccatctgcgcagacgatcaggc
atctccgaggatgcggcttcctttattttgcaagtattcgaggaattatcctttattgaa
aaggacggccacagcattcggtgcacatccgctccttccaagcaagatttaaccacagcg
caagcttatcaacgacgcgtaaaacagttggaagctgaagaaatattcgtttattccagc
gcgcaggagctgactgactggttcctgaagcaacctgggtttgaatcgtctgaaccacaa
caacctaatttattggaggaaatcgtatga
DBGET
integrated database retrieval system