Paenibacillus swuensis: SY83_15045
Help
Entry
SY83_15045 CDS
T04884
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pswu
Paenibacillus swuensis
Pathway
pswu00470
D-Amino acid metabolism
pswu00550
Peptidoglycan biosynthesis
pswu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SY83_15045 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SY83_15045 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pswu01011
]
SY83_15045 (murD)
Enzymes [BR:
pswu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SY83_15045 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pswu01011
]
Precursor biosynthesis
Amino acid ligase
SY83_15045 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ANE47369
UniProt:
A0A172TJY3
LinkDB
All DBs
Position
3412842..3414260
Genome browser
AA seq
472 aa
AA seq
DB search
MKHPSHYARQHIIVLGMAKSGSAVAKVFHALGASVTVNDMKDRGLCPEADELSALGISVL
CGGHPDDLVHEGVALVVKNPGIPYTAPPIVRALELGIEVVTEVEVAYHVCPAPMIGITGS
NGKTTTTTWIGRMLDRAGLRPIVAGNIGRALTDAAIEADEDNWMVVELSSFQLKGTDAFR
PRIACLLNLAETHLDYHGTMDDYIASKAKLFANQTAEDTAVLNWDDAVCRSLVPGLQARL
LPFSARETLTRGVYLDPPLKPGEALGERRIVYAEGTGAVREILRTQDLGIPGTFNAENAL
AAAAVAIAAGAPLTAIAEELSAFRGVEHRLEFVAKVDGVTFYNNSKATNATATISAVESL
DQPIVLIAGGLDRGSDYAELLPVFERRVKALVALGETRGKLLGVARQAGIRFTDSVDTGE
DAAAILDAAVRRAAAFAEPGDIVLLSPACASWDMFASYEERGSIFKKSVHSL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatccgtcgcactacgcccgtcaacacattatcgtattaggtatggccaaatcg
ggaagcgcggtggccaaagtatttcacgctctgggcgcttccgtcacggtaaatgatatg
aaagaccgcggcttatgtcccgaggctgatgaattgtcggctttgggtatttctgttcta
tgcggcggtcatccggatgatcttgttcacgaaggcgtggcgcttgtggtcaagaacccg
ggcattccttacacggctccgccgattgtcagagcgcttgagcttggcattgaagtggtg
acagaggttgaggtggcttaccatgtatgtccggcgccgatgattggcattaccggctcg
aacggcaagacgacaacgacgacctggatcggcaggatgctggatcgcgcgggacttcgt
ccgattgtcgccgggaatatcggaagggctcttaccgatgcggccatagaagcggacgag
gataactggatggttgtcgagctaagctctttccaactgaagggcacagacgcgtttcgt
cccagaatagcctgcttgctaaacttagcggaaacgcatctggactaccatggcacgatg
gacgattacatcgcttcgaaggcgaagctgttcgcgaaccagacggcggaggataccgcc
gtgctgaactgggacgacgcggtatgccgctcgcttgtccctggcctgcaggcgcgcttg
ctgccgttctcggcgcgcgagacccttacgcgcggcgtctacctggatccgccgctgaaa
cccggcgaagcgctcggcgagcggcgcatcgtttacgcggaaggcaccggggcggtgcgc
gagatcttgcgtacgcaagatctcggcattcccggcaccttcaacgcggagaacgcgttg
gcggcggcggcggtagccattgccgcgggcgcgccgctgaccgcgatcgccgaggagctc
tcggcgtttcgcggggtagagcatcgcctggagtttgttgcgaaggttgacggcgtcacc
ttctacaacaactctaaggcgacgaacgcgaccgccacgatctcggcggtcgaatcgctc
gatcagccgattgtgctgatcgcgggggggctggatcgcggctccgactatgcggagctg
ctcccggtgtttgagcgccgggtgaaggcgctcgttgcgctcggggagacgcgagggaaa
ttgctcggcgtcgcgcgtcaggcaggaatcagatttacggattccgtcgatactggggag
gatgcagccgctatacttgatgcagccgttcgcagagcggcggcgttcgcggagcccggc
gacattgtcctgttatcgcccgcttgcgcgagctgggacatgttcgcctcctatgaggaa
cgcggaagcatttttaaaaaatcggtgcatagtctttaa
DBGET
integrated database retrieval system
