Paenibacillus swuensis: SY83_15550
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Entry
SY83_15550 CDS
T04884
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pswu
Paenibacillus swuensis
Pathway
pswu03022
Basal transcription factors
pswu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SY83_15550
09124 Replication and repair
03420 Nucleotide excision repair
SY83_15550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswu03021
]
SY83_15550
03400 DNA repair and recombination proteins [BR:
pswu03400
]
SY83_15550
Enzymes [BR:
pswu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SY83_15550
Transcription machinery [BR:
pswu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SY83_15550
DNA repair and recombination proteins [BR:
pswu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SY83_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANE47458
UniProt:
A0A172TK91
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All DBs
Position
3515927..3517648
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AA seq
573 aa
AA seq
DB search
MKYRPEQPLIVQGDLTVLLETRNTRADEAAKVLGRFADLVKTPEHIHTYRMTPLSIWNAA
ASGIHVEEVIRTLEDYSKFDLPAQVRKEIVKYMGRYGMLLLESDGEYLRLRSSNTSALKE
LAAESSLAALLTWDEDTGTGKVDAENRGLVKQELTRLGFPVTDLVGYHEGESLQVQLKSN
LDEGNPNPFYLRDYQEEAVDSFYQEGSVHGGSGVLVLPCGAGKTIIGIAAMARLHCATLI
LTSNVTSVRQWTQEIVAKTNIKEEQIGEYSGDRKEVRPITIATYQILTHRKDKAASFSHM
TLFNERDWGLIIYDEVHLLPAPVFRVTADIQATRRLGLTATLIREDGREEDVFSLVGPKR
YDMPWKELEHQGWIAKVYCSEIRVPLSEDTRSQYAVADAKMRFRIACENPLKLDIVRYLL
QLHRGRQTLIIGQYLDQLHHVAEQLSLPLITGSMPHQERDELYAQFKKGEIGVLIVSKVA
NFAVDLPDASVAIQISGSFGSRQEEAQRLGRVLRPKQDENTAFFYTLVSKDTKEQEFALN
RQLFLIEKGYRYAITDAAAFTGGEDTHGQFAVQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccgtccggaacaacccttgattgtacagggggacttgaccgtgctgcttgaa
acgagaaatacccgtgcggatgaagcggcgaaggttctagggaggtttgcggacctcgta
aagacacccgaacatatccacacgtacagaatgacgcctttatccatatggaatgcggca
gcatcaggtattcacgttgaagaagttatccgaacgcttgaagattacagtaaatttgat
ttgccggctcaagtgagaaaagagatcgtcaagtatatgggaaggtacgggatgcttctc
ttggaatcggatggcgaatatctccgtcttcgctcaagcaacacctcagccttaaaggag
ttagctgcggaatcttcattagctgccttactgacttgggatgaggatacaggtacaggg
aaagtggatgctgaaaaccgcggtctggtcaaacaagaattaacccgtctgggttttccg
gtaacggatcttgtcggctatcacgaaggggagtcactacaggtccaattgaagagcaac
ctggacgagggcaaccccaatcccttttatctgcgtgactatcaggaggaagcggtcgat
tccttttaccaagaagggagtgtacacggagggagcggggtactggtgctcccttgcggc
gcgggtaaaaccatcattggcatcgcagcgatggcccgattgcattgcgctacgttaatc
cttacgagtaatgtgacctcagtcaggcaatggacacaggaaattgttgcgaaaacgaat
ataaaggaagaacaaatcggtgaatacagcggggatcgcaaagaagtgcgtcctataacg
attgcaacctatcaaattctgacccatcgcaaagataaggctgcttccttctcgcatatg
accctttttaatgaacgggattggggattgattatttatgacgaggttcacctgttaccc
gcccccgtattccgggtgacggctgatattcaggccacgcgaaggcttggactaacggcg
acgctgatccgggaagatggccgggaggaagacgtgttttctctggtcgggccgaagcgg
tacgatatgccatggaaagagcttgagcatcaagggtggatcgccaaagtgtactgcagt
gaaattcgcgtgccattgtccgaagacactcgttcacaatacgcggttgcggatgccaaa
atgcgatttagaattgcttgcgagaacccgctgaagctggatatcgtgcgctatctgtta
caacttcaccgcggtcgacaaacgttaattatcggtcaatatttggatcaattacatcat
gtggccgaacaattgagcttgcctctcattacggggagcatgccgcatcaggaacgagat
gaactctatgcccagtttaagaaaggggaaattggagtcctgatcgtttccaaagtagct
aatttcgcggtggatttacccgatgccagcgtagcgatccaaatctcgggcagcttcggg
tcaaggcaggaggaagcccagcgattgggcagggtattaaggccgaagcaagacgagaac
accgctttcttctacaccttggtatccaaagacacaaaggagcaagagtttgcgctaaac
agacagctgtttctgatcgaaaaagggtatcggtacgccatcacagatgcggccgcgttc
accggcggggaggatacgcatggacagtttgcagttcagtag
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