Paenibacillus swuensis: SY83_18040
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Entry
SY83_18040 CDS
T04884
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
pswu
Paenibacillus swuensis
Pathway
pswu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SY83_18040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswu03400
]
SY83_18040
DNA repair and recombination proteins [BR:
pswu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SY83_18040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
HTH_70
SLX1_C
CIS_tube
Saf4_Yju2
SLX9
Motif
Other DBs
NCBI-ProteinID:
ANE47878
UniProt:
A0A172TLG3
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Position
complement(4029722..4030618)
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AA seq
298 aa
AA seq
DB search
MQTVWKGAINFGLVNVPVKMFSSTQNNDVPMKLLHKKLSVPINYVRTCPKCEEDVEWSDI
VRGYEYEPGHFVTFDKDELDKLASEDSREIKILSFANLDEIDPVYFQKTYYLAPNESGVH
AYQLLAKALEETQKIGIANVTIRSKSSLAAIRVIDGYLAMATMHYAEEIRPLKQVPNLPE
LKDTNEKELEMAKSLIEQLTAEFNPAQYEDDYKERLMDAIEDKIHGKEVKFAPEEKQRNV
IDLMDALKASLAQAQPSEQPVKKTSTRAKTNKTKKTSAAKPSKSPRAGAKSRSKKTGA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacggtatggaaaggcgcgattaattttggcttggtgaacgtacctgtaaagatg
ttctcttctacgcaaaataacgatgtacccatgaaactccttcacaaaaagctctctgta
ccgataaattacgttagaacatgcccaaagtgtgaggaagatgtcgagtggagtgatatc
gtccggggctatgaatacgaaccgggtcattttgtaacgtttgacaaggatgagttggac
aagcttgcttccgaagactcacgtgaaatcaagatattgagttttgcgaatttggatgag
attgaccccgtttattttcagaagacctattatctggcaccgaacgaatctggggtacat
gcttatcaattgttagctaaagccctggaggagactcaaaaaatcggaattgccaatgtc
acgatccgaagcaaaagcagtttagccgcaattcgggtcattgacggttatttagccatg
gcaaccatgcattacgccgaagagatacgcccgctaaagcaggttccgaatctgccggag
ctcaaagacacgaacgaaaaggaattagaaatggccaagtctttaatcgaacaactaact
gctgaattcaatccggcgcaatatgaggatgattacaaggaacgtttaatggacgcgatt
gaagataaaattcacggaaaagaagtgaaattcgcgcctgaagaaaagcaacgaaacgtt
attgatttaatggatgcgttaaaagctagtttggcacaggctcaaccttcggaacaaccc
gtcaaaaaaaccagtacccgagccaagacgaataaaaccaaaaagacctctgcagctaag
ccatccaaatctccccgcgccggcgctaaatctcgttcaaagaaaacgggtgcatag
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