Paenibacillus swuensis: SY83_20635
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Entry
SY83_20635 CDS
T04884
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pswu
Paenibacillus swuensis
Pathway
pswu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SY83_20635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswu03019
]
SY83_20635
03009 Ribosome biogenesis [BR:
pswu03009
]
SY83_20635
Enzymes [BR:
pswu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SY83_20635
Messenger RNA biogenesis [BR:
pswu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SY83_20635
Ribosome biogenesis [BR:
pswu03009
]
Prokaryotic type
rRNA helicases
SY83_20635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
COG2_N
CMS1
Helicase_RecD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANE48293
UniProt:
A0A172TNG6
LinkDB
All DBs
Position
complement(4570601..4572193)
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AA seq
530 aa
AA seq
DB search
MITFSELGLEPKVMQSISDMGFEEATPIQAKSIPIAISGRDLIGQAQTGTGKTAAFGIPL
INKIPTSEEKISALIMAPTRELAIQVADEIGKLARFKGIRTLAIYGGQDIGKQIRALKKK
PQVIIGTPGRLLDHINRKTIRLDDVKTVILDEADEMLDMGFMEDITSILSLVPKERQTML
FSATMPPNIRKLADQFLNNPEHVSVIPKQVSAPLIAQAYVEVHERQKFDALSRLLDMEAP
ELAIIFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWTFVSPREIDHLHFIEKVTR
HKITKKPLPSLAEAIEGKQKLTAEKLIEVMNNEDYNEFKAISIQLLEQYDSVQLIAAAIK
LLTGERKDVNVELTPEEPLRAKKKRFGDSKFGGGNRRFGSGGGSGSGGYGSGGSRSSSGP
RSSGPRSGGSWKDGERRSDGSSSSRGGYSKDSRPNSDGPRKPRSTFAETK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgattacatttagtgaacttggcttagagccgaaggtcatgcaatccatcagcgacatg
ggctttgaggaggcaacaccgattcaggccaaatcgattcctatcgccatctcaggcagg
gacttaattggtcaagcgcagacaggtacgggaaagacagctgcgttcggtattccgttg
attaacaagatccccacttccgaagagaagatttccgctttaatcatggcgccgacaagg
gaattggcgattcaggttgcggatgaaatcggtaaattagcacggtttaaaggtatccgt
actcttgcgatttacggtggacaggatatcggtaagcaaattcgcgcattgaagaagaag
ccgcaagtaattatcggaacacctggtcgcttgctggatcatattaaccgtaagaccatt
cgtttagacgatgtgaagacggttattttggatgaagcggatgaaatgctggatatgggc
ttcatggaagatattacgtccattctgagccttgtgccgaaagaacgtcaaacgatgttg
ttctcagctacaatgcctccgaacattcgcaaactggcggaccagttcctgaataatcct
gagcatgtttcggttattcctaaacaagtcagcgcgcctttaattgctcaagcctatgta
gaggttcatgagcgccagaagtttgatgcgctcagccgcttgttggatatggaagctcct
gagcttgccatcatcttcggacgcacaaagcgccgtgtagatgaacttgcggaagctctg
cagaagcgcggttactccgctgacggtctgcatggcgacttgtctcagaatcagcgggat
gcggttatgcgtaaattccgtgacggcagcattgacgtattggtagctactgacgtagct
gcgcgcggtcttgatgtttccggtgtaacacatgttatcaacttcgaccttcctcaagat
ccggaaagctatgttcaccggatcggccgtacaggtcgcgcgggtaaagaaggaacggct
tggacgttcgtgtcgcctcgcgaaattgatcaccttcactttatcgaaaaggtgactcgt
cacaaaattacgaagaagccattgccaagtcttgcggaagccatcgaaggcaaacaaaag
ctaacggctgagaaacttattgaagtgatgaacaacgaggattacaacgaatttaaagcc
atctccattcaacttcttgagcaatatgactctgtacaactgattgcggcagcgattaaa
ttgttaacgggcgagcgtaaagatgtgaatgtggagcttacaccggaagagccgcttcgc
gcgaagaagaaacgcttcggagacagcaaattcggaggcggcaacagacggtttggcagc
ggcggcggtagcggcagcggcggatacggttccggcggctccagaagctcttccgggcct
cgcagcagcggacctcgcagcggcggcagctggaaagacggagagcgtcgcagcgacggt
agcagcagcagccgtggcggatactccaaggacagccgtccgaattcggatggaccgcgt
aaacctcgcagcacttttgcggaaacgaaataa
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