Providencia stuartii ATCC 33672: DR96_1458
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Entry
DR96_1458 CDS
T03282
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psx
Providencia stuartii ATCC 33672
Pathway
psx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DR96_1458 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psx03021
]
DR96_1458 (rpoC)
03400 DNA repair and recombination proteins [BR:
psx03400
]
DR96_1458 (rpoC)
Enzymes [BR:
psx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DR96_1458 (rpoC)
Transcription machinery [BR:
psx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DR96_1458 (rpoC)
DNA repair and recombination proteins [BR:
psx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DR96_1458 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
AIN64843
UniProt:
A0AAJ1JI46
LinkDB
All DBs
Position
1590414..1594634
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLIKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERGQILTEEQYLDALEEFGDEFDAKM
GAEAIQGLLKNLDLENECETLREELNETNSETKRKKLTKRIKLLEAFIQSGNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLAGPKEAERVYRSG
HASLHARVKVRITEEVKDGEGNITINTSMVDTTVGRAILWMIVPKGLPYSLVNQALGKKA
ISKMLNTCYRVLGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKAGIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRDGEEEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRERVL
GRVTAEDILIPGTADILVPRNTLLHEKWCDLLEENSVDSVKVRSVVSCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNPGTLKL
VNAKFVTNSEGKLVITSRNTELRLIDEFGRTKESYKVPYGAHLTKGDGEAVNGGETVANW
DPHTMPVVSEVSGIIRFSDMIDGQTMTRQTDELTGLSSIVVLDTAERTSGGKDLRPALRV
VDANGNDVLIPNTDMPAQYFLPGKAIVQLDDGIAINVGDTLARIPQESVGTKDITGGLPR
VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPMDGSDPYEEMIPKWRQLNVFE
GEIVERGDVISDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTISDAGSSEFLEGEQVEYSRVKVSNRKLEQDGKIPAKFERDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQDRIRRRHLNDVVE
APQVSADEATANLAELLNAGFSSDNN
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttaattaagtttctgaaagcgcaaaccaagaccgaagagtttgatgcgatc
aaaattgctctggcatcacctgatatgatccgttcatggtcattcggtgaagtgaaaaag
ccagaaaccattaactaccgtacattcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagactacgaatgtctgtgcggtaagtacaaacgtttaaaacac
cgcggtgtgatttgtgagaaatgtggcgttgaagtcacccagactaaagttcgtcgtgag
cgcatggggcatattgaacttgcttctccgacagcacacatctggttcttaaaatcactg
ccatcccgtatcggtttgttacttgatatgcctctgcgtgatatcgagcgtgttctgtat
tttgaatcttatgtcgttgttgaaggcggtatgactagccttgaacgtggacagatcctg
acagaagaacaatacctcgatgcgctggaagagttcggtgacgaatttgacgcgaaaatg
ggtgcggaagcaatccaaggtctgctgaaaaacctcgatcttgagaacgagtgtgaaaca
ctacgcgaagagttgaatgaaactaactctgaaactaagcgtaagaagctgactaagcgc
attaaactattagaagcgttcattcaatctggcaacaaaccagagtggatgatcctgaac
gttctacctgtgttaccacctgatctacgtccattagttcctctggatggtggccgtttc
gcaacgtcagatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtcttctggatctggctgcgccagacatcatcgtacgtaacgaaaaacgtatgctgcaa
gaagcggttgacgcactgttagataacggtcgtcgtggtcgtgcaattacaggctctaac
aaacgtcctctgaaatctttggctgatatgatcaaaggtaaacaaggtcgtttccgtcag
aacttgctaggtaagcgtgttgactactcaggtcgttcggttattacagtaggtccatac
ctgcgtctgcatcagtgtggtctgcctaagaaaatggctcttgagctattcaaaccattt
atttatggcaaattagaactacgtggtctggcaacaaccattaaagcagcgaagaaaatg
gttgagcgcgaagaagcggtagtttgggatatcttggatgaagttatccgtgaacaccca
gtcatgctgaaccgtgcaccaacacttcaccgtctgggtatccaagcgttcgagccaatt
ctgatcgaaggtaaagctatccaattgcacccactcgtttgtgcggcatataacgccgac
ttcgatggtgaccaaatggcggtacacgttcctctaactctggaagctcagttagaagca
cgtgcgttgatgatgtcaaccaacaacattctgtcaccagcaagtggtgagcctatcatc
gttccttcacaggacgttgtattgggtctctactatatgactcgtgactgcgtaaacgcg
aaaggcgaaggcatggttctggccggcccgaaagaagctgagcgtgtttaccgttcaggt
catgcatcactgcatgcccgcgttaaagtccgtatcactgaagaagtgaaagacggtgaa
ggtaacattacgattaacaccagtatggttgatactactgttggtcgtgcaattttgtgg
atgatcgtaccaaaaggcttgccttattcgctggttaaccaagcgctaggtaagaaagcg
atctccaaaatgctgaacacctgttaccgtgtactgggtctgaaaccaacggttattttt
gctgaccaaatcatgtataccggttttgcctacgcggcacgctctggtgcatctgttggt
atcgacgatatggttattcctgagaaaaaagcagggatcatcgccgaagcagaagcggaa
gttgcagaaattcaggaacagttccagtctggtctggtgacagcaggcgaacgttacaac
aaagttatcgatatctgggctgcggcaaacgaacgtgttgctaaagcgatgatggaaaac
ctgtcaactgaaacagttattaaccgtgacggtgaagaagaacaacaggtttctttcaac
agtatctttatgatggccgactccggtgctcgtggttctgccgctcagatccgtcagctt
gcgggtatgcgtggtctgatggctaagccagatggctcaatcatcgaaacaccaatcacg
gcgaacttccgtgaaggtctgaacgttctccagtactttatttctacgcacggtgctcgt
aaaggtcttgcggataccgcattgaaaacagcgaactctggttatctgactcgtcgtctc
gttgacgttgctcaggacttggttgtgactgaagacgattgtggtactcacgaaggtatc
ctgatgactccggttatcgagggtggcgatgttaaagaaccactgcgtgagcgtgtattg
ggtcgtgtgactgcggaagacatcctgatcccaggtaccgcggacattctggttccacgt
aatacgttgctacacgaaaaatggtgtgacctgttagaagaaaactctgttgacagcgtt
aaagtccgttcagtcgttagctgtgaaactgacttcggtgtgtgtgctcactgttatggt
cgtgacctggctcgtggtcatatcatcaacaaaggtgaagctatcggggttatcgcggca
cagtcaatcggtgaaccaggtacacagttgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggcagcagaatctagcatccaagttcgtaatccaggtacgctgaaactg
gttaacgcgaaatttgtgactaactcagaaggcaaactggttattacttcacgtaatacc
gaattacgcctgattgatgagttcggtcgtactaaagagagctacaaagttccttacggt
gcgcacctgactaaaggtgacggtgaagcagttaacggtggcgaaactgttgctaactgg
gatccacataccatgccagttgtcagtgaagtatccggtattatccgcttctctgacatg
attgatggtcaaacaatgactcgtcagactgatgaattaaccggtctgtcttcaatcgtt
gttctggatactgcggaacgtactagtggtggtaaagacctgcgtcctgcattgcgtgtt
gttgatgcaaatggtaacgatgtgcttattcctaacacagacatgcctgctcagtacttc
ttaccgggtaaagcaattgttcagttagatgatggcatcgctatcaacgtgggtgatact
ttagcgcgtattccacaagaatctgtggggactaaagatatcacgggtggtctaccacgc
gttgctgacctgtttgaagcacgtcgtccgaaagagcctgcaatcttggctgagatcagc
ggtattgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggtgatcacaccgatg
gatggttctgatccgtatgaagagatgatccctaaatggcgtcagctcaacgtgtttgaa
ggtgagatcgtagagcgcggtgacgtgatctctgatggcccagagtctccacacgatatc
ttgcgtctgcgtggtgttcatgcggttacgcgttatatcacgaacgaggttcaggaagtt
taccgcttacaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagtgactatctctgacgcgggaagctctgaattccttgaaggtgagcaggtt
gagtactcacgtgttaaagtttctaaccgtaaacttgagcaggatggtaagatcccagct
aagttcgaacgtgacctgttgggtatcacgaaggcatctctggcaacagaatccttcatc
tcagcagcatcgttccaagaaaccacacgcgtactgacagaagctgccgttgcaggtaaa
cgtgacgagcttcgcggtctgaaagagaacgttattgtgggtcgtctgatcccagcaggt
actggttttgcgtatcaccaagaccgtatccgtcgccgtcatctgaatgatgttgtggaa
gcgccacaagtcagcgcagatgaagctacggctaacctagctgaactgttaaatgcaggg
ttcagcagcgataacaattaa
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integrated database retrieval system
