Providencia stuartii ATCC 33672: DR96_2261
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Entry
DR96_2261 CDS
T03282
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psx
Providencia stuartii ATCC 33672
Pathway
psx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR96_2261 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psx03019
]
DR96_2261 (rhlE)
Enzymes [BR:
psx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR96_2261 (rhlE)
Messenger RNA biogenesis [BR:
psx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR96_2261 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AIN64224
LinkDB
All DBs
Position
2463876..2465213
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AA seq
445 aa
AA seq
DB search
MTSFSDLALNEEILLAINELGYEAPTPIQQQAIPAVLDGHDLLASAQTGTGKTAGFTLPI
LQKLISTPRIGKDRKPIRALILTPTRELAAQVAENVKEYSRHLRIRSFVVFGGVSINPQM
MKLRGGVDILIATPGRLLDLEHQNAVNLSQVEILVLDEADRMLDMGFIHDIRRVISKLPK
KRQNLLFSATFSNEIKQLANKLLDNPVTIEVAPRNSASEQVTQFVHHVDKKRKAELLSYM
IGRENWQQVLVFTRTKHGANRLAEHLNKDGVKAAAIHGNKSQGARTRALADFKSGDVRVL
VATDIAARGLDIEQLPYVVNFELPNVTEDYVHRIGRTGRADATGMAVSLVCVDELKLLKD
IEKLLKKPVPVMAIEGYEPDPSIKPEPIQKAPQRNNERRSANKRHNTSVKPRRERTGADS
SKDKSASASPWKSAQKKVRQGRGEG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgactagtttttcagacctcgcattaaacgaggaaattctgctcgccattaatgagtta
ggctacgaagcccctacgcctatccaacagcaagctatcccagcagtccttgatggtcac
gacctcttagcgagtgctcaaacaggaacagggaaaacggcgggttttaccttacccatt
ttacaaaaattaatttcgactcctagaattggaaaagatcgcaaaccgattagggcattg
atcttaacgccgacacgtgaattggctgcgcaagtcgctgagaatgttaaggaatatagc
cgtcatttaaggatccgctcatttgtcgtgtttggtggtgtcagcatcaacccacaaatg
atgaagttacgtggtggtgttgatattttgattgcgacgccggggcgattactcgaccta
gagcatcaaaatgcggtcaatttatctcaagttgagatccttgttttggacgaagccgat
cgtatgcttgatatggggtttattcatgatattcgccgtgtgatcagtaagttacctaaa
aaacgtcaaaacctgctgttttcagctacattctctaatgaaattaaacaattagcgaat
aaattactggataaccctgtgacgatcgaagtcgctcctcgtaactcggcttctgagcaa
gtcacccagtttgtccatcatgtcgataagaaacgtaaagcagagctgttatcttacatg
ataggccgtgaaaactggcagcaagttcttgtttttacacgcacaaaacatggtgcgaac
cgccttgctgaacatctaaataaagatggcgtaaaagcggcggcaattcatggtaataag
agccaaggcgcgcgtacacgtgcattagcagattttaaatcaggtgatgttcgagtactg
gtggcgacagatattgcggcacgtggtttagatatcgaacaattgccgtatgttgttaac
tttgaactgcctaatgtaacggaagattatgttcaccgtattggtcgtacagggcgagca
gacgcaacaggaatggctgtttcactggtatgtgttgatgagttaaagctgctaaaagat
attgaaaagctactaaaaaaaccggttcctgttatggcgatagaaggttatgagcctgat
ccttccattaaacctgaacctatccaaaaagcgccgcagcgtaataatgaaaggcgtagt
gcaaataaacgccataatacgtctgtgaagccgcgccgcgaacgtactggtgctgatagc
tcaaaagataaatcggcatcagcctcaccatggaaaagcgcacaaaaaaaagtgcgtcag
ggacgcggtgaaggctaa
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