Providencia stuartii ATCC 33672: DR96_319
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Entry
DR96_319 CDS
T03282
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psx
Providencia stuartii ATCC 33672
Pathway
psx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DR96_319 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psx03400
]
DR96_319 (recB)
Enzymes [BR:
psx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DR96_319 (recB)
DNA repair and recombination proteins [BR:
psx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DR96_319 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIN63948
LinkDB
All DBs
Position
complement(354281..357898)
Genome browser
AA seq
1205 aa
AA seq
DB search
MSKMQISSQLLDAFSLPLQGQRLIEASAGTGKTYTIGILYLRLLLGLGGENAFPRPLTVE
EILVVTFTEAATNELRGRIRERIHKMRLACIRDGVGFEKEPEYLELLSQIPTPEQREFAI
NWLLTAERQMDEAAIYTIHGFCQRMLVHNAFESGVLFEQTMIQDELPIQKQACADFWRRH
FYPLDYSMAKVVLSQWNSPEALLADIKPFLQGDMPYIVNETPNKETFEERHQRLIELITQ
VKSLWLAGCSEIEKRIVSSDVDKRSYSSRFLPSWLDKMARWAEEETQDYQLPKEIIRFSQ
AALHDKSKSGSGPEHEVFALIDELLSQSLTIKDLIIPVAITEVRQNIAREKHSRGEMGFD
DLLTRLDNALKKQGGDYLAKAISQRFPVAMIDEFQDTDPQQYRIFQRIYHEVENSALLFI
GDPKQAIYAFRGADIFTYIAAKKQVSAHYTLETNHRSSEQMVEAVNRIFSHCEKPFIFEQ
IPFNPVNFAAKNAGKILKHHGQAVKALTFWQIDAEAVSIADYEQTMASQCAAQISQWLQG
GAEGTSLFQHSDGKQHPVSAADITVLVRSRREATLIRDALNQLGIPSVFLSNRESVFATQ
EARDLLWILQAVLSPEKERILRSALATGTLGLNAKEIDALNYDEKAWEALVDEFSQYALI
WRKRGVLPMLRVLMAERHIAESLLSAVEGERRLMDLMHIGELLQEMSLQLEGEHTLVRWL
TQQIAHPDHQSNAQQMRLESDKHLVQISTIHKSKGLEYKIVWLPFASNFLPQSKALYHDR
ENYGTHLDLDDSEENVALADEERLAEDLRLLYVALTRAIYHCSVGIAPIIKGNRKKSGET
DLHLSALGYLIQKGEAGDFSLLNKGLAELAGTAISVERIEYTESISMSFDQDDNESLSAR
DITRFFDYHWRVTSYSGLSYSSGHSGSGSEQAISAEQLATSLAPKIDVEASLDATLPEID
EFTLTPHLFPRGTAPGTFLHELMEEMDFSQEIPLEWLVEKLQGAGFDTKWADMLQAWLAA
IVDAPLADDGLCLSALAPQDMLDELQFYLPIDNLLQAEDVDRITHRYDPLSAACPPLNFE
KVQGILKGFIDLTFLWKGKFYLLDYKSNYLGDDAASYTQSAMAEAMIDHRYDLQYQLYSL
ALHRYLKQRLPNYQYDVHFGGVYYLFLRGIDRAESKNGIFYYRPEKAFIDELDRLFRNAQ
EGSEP
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaatgcagataagttcccaattgttagatgctttttcgttaccattacaaggc
caacggttaattgaagcctctgcgggtacaggcaaaacctatacgatagggatactctat
ctgcgtttactattagggttagggggggagaatgctttcccccgacctcttacagttgaa
gaaattctcgtagtgacatttacagaagccgcaactaatgaattacgagggcgtatacgt
gagcgaattcataaaatgcgccttgcttgtatccgtgatggggtcggtttcgaaaaagag
ccggaatatttagagctactctcgcaaattccaacaccagagcaacgtgagtttgccata
aattggttacttaccgctgagcgtcaaatggatgaagctgcgatttataccattcatggc
ttttgtcagagaatgttagttcacaatgcttttgaatcaggcgttttatttgaacagacg
atgatccaagatgaacttccgattcaaaagcaagcttgtgctgatttttggcggcgtcat
ttctatccactcgattattcaatggcaaaagttgttttgtcacaatggaatagtccggaa
gcactactggcggatattaagccttttttacaaggtgatatgccatacatagttaatgaa
acgccaaataaagaaacctttgaagagcgtcaccagcgtttaatcgaactcattactcaa
gtgaagtctttatggctagcagggtgctctgagattgaaaaacggattgttagctcagat
gttgataaacgtagttatagctcgcgctttttaccgagctggttagataaaatggcacgc
tgggcagaggaagaaacacaagattaccaactgccaaaagaaattattcggttttcgcaa
gctgccttacatgataaatcgaaaagtggctcaggccctgagcacgaggtattcgcgctc
attgatgaacttctttcgcaatccctaaccattaaagatctgattattcccgttgccata
acagaagttaggcaaaacattgcccgagaaaaacacagtagaggcgaaatggggtttgat
gatttgctcactcgcttagataacgcattaaaaaagcagggcggagattacttagctaaa
gccattagccagcgtttccctgttgcgatgattgatgagtttcaggataccgaccctcaa
caatatcgtatttttcagcggatttatcatgaggttgaaaatagtgcattgttatttatt
ggtgaccctaaacaagctatttatgcgtttcgcggcgctgatatttttacttacattgca
gcgaaaaagcaggttagtgctcactatacactagaaactaaccatcgctcctccgagcaa
atggttgaagctgttaaccgtatttttagccattgcgaaaaaccttttatttttgagcag
atcccatttaaccctgtcaactttgcagccaaaaatgcgggcaagatattaaagcatcat
ggtcaagcagtaaaagcgctaacattttggcaaattgatgcagaagcggtttctattgct
gattatgagcaaacaatggcatcacaatgcgccgcacagatcagtcaatggttacaaggg
ggagctgagggaacaagcttatttcagcatagtgatggaaaacaacatccggtttctgcg
gctgatattacagtcttggtgagaagccgacgtgaagcaacactgatccgtgatgcactc
aatcagttgggtatcccatctgtcttcctatcgaatagagaaagtgtttttgcgacccaa
gaagcgcgtgaccttttatggattttacaagcggtactgtcgccagaaaaagagcgtatt
ttacgtagtgcactagcaacgggaactttagggctaaacgccaaagagattgatgcgcta
aattacgatgaaaaggcatgggaagcgctggtggatgagttttctcaatacgcgctaatt
tggcgtaagcgcggggttctgccgatgcttcgggttctgatggcggagcgccatattgca
gaatcattgctttctgccgtggaaggtgaacgtcgtttaatggatttgatgcatattggt
gaactgcttcaagagatgtctcttcaattagaaggagagcacacattagtgcgttggtta
acacagcaaattgctcatcctgatcatcaatcgaacgcacagcaaatgcgtttagaaagt
gataaacacctagttcaaatcagtaccatccacaaatcaaaaggccttgaatacaagatt
gtttggctgccatttgcgagtaattttttaccacaatcaaaggcgctgtaccatgacagg
gagaattacggcactcatttagacttagatgatagtgaagagaacgttgcgcttgcggat
gaagagcgtttggcggaagacttacggctactctatgttgccttaacacgtgcaatctat
cattgtagtgttggtattgcgccaataattaaaggtaaccgcaagaaaagtggtgaaacc
gacctacacttatctgctttggggtatttaattcaaaagggagaagcaggggattttagc
ttactcaataaaggattagcagagctcgccggtacagcgattagtgtcgagcgcattgag
tatacagaatctatctcaatgtcttttgatcaagatgataatgagtcattgtcagctagg
gatattactcgcttctttgactaccattggagagtaaccagttattcagggttgagctat
agcagtggtcatagtggcagtggtagtgagcaagcgataagtgctgagcagcttgcgacc
tcactggcacctaaaatagatgtggaagctagcttagatgccactttaccagaaatcgat
gaatttacgttgacaccacatctgtttccccgcggaactgcaccgggaacttttcttcat
gaacttatggaagaaatggacttttcacaagagatcccccttgaatggttagttgagaaa
ttgcaaggagcagggtttgataccaaatgggctgacatgttacaggcatggctggcggct
attgtggatgcgccactggcagatgatggtttatgcttgtctgcattagcgcctcaagat
atgttagatgaactacagttttatcttcctattgataacttgcttcaagctgaagatgtt
gatcgcattactcatcgatatgatccgctatctgcggcttgccctccgcttaattttgaa
aaagtacaaggtattttaaaagggtttatcgatttaacgtttttatggaaggggaaattt
tatctccttgattataaatcaaattacctcggtgatgatgcggctagctatacgcaatct
gcgatggctgaagcgatgattgaccaccgttatgatcttcaatatcaattatattcatta
gcgctgcatcgttaccttaaacagcggttacctaactatcagtatgatgttcattttggt
ggcgtctattacctctttcttcgtggcattgatcgggcagagtcaaaaaatggtattttt
tattatcggccagaaaaggcatttatcgacgaactggaccgactatttcgtaacgcacaa
gagggaagtgagccatga
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