Providencia stuartii ATCC 33672: DR96_3226
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Entry
DR96_3226 CDS
T03282
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psx
Providencia stuartii ATCC 33672
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psx03016
]
DR96_3226 (rnb)
Enzymes [BR:
psx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DR96_3226 (rnb)
Transfer RNA biogenesis [BR:
psx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DR96_3226 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AIN65927
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Position
3485704..3487647
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGLVKSTDKGFGFLEVDGQKSYFVPPPQMKKVMHGDRV
IAAIHTDKDREFAEPEELVEPFLSRFVGRIQKKDNDNRLFVIPDHPLLKDAISCRPVKDI
DHEFAQGDWVVAQMRRHPLKGDKGFYADITEYITDANDHFAPWWVTLRRHQLDRAEPQMV
HSERDDEGIERVDLTDLHFVTIDSASTEDMDDALYIERTADGHLKLYIAIADPTSYIKEG
SELDKLALARAYTNYLPGFNIPMLPRELSDNLCSLRPNERRPALVCAATILDDGNLAEDI
QFFSAWVESKSKLVYDEVSDWLEKSGSWQPTNDADQQQIELLKEMADKRHQWRQQNALVF
KDRPDYRFLLDDKGNVIDIVVESRRTANRIVEEAMITANLCAATQLKNTLGFGVFNVHMG
FEPLQIEQVVQTLKEHGIETTAESLLTLEGFRQLRRQLDAQPTQFLDSRIRRFQTFAEVK
GEPGPHFGLGFEAYATWTSPIRKYTDIVNHRLLKSVIAGKPSTDKPTEELSIKLAERRRA
NRMAERDVGDWLYARFLKPFEGTDKAFPAEIIDITRGGVRVRLTDNGAVAFIPAPFLHAV
RDEIQCSQETGSVLIKGEPAYKLNDIINVNIAEVRMETRNIVARPAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaacccattgctcgcgcaacttaaacagcaactgcactcccaaacgcct
cgcgttgaaggattggtaaaaagcaccgataaaggtttcggttttctcgaagtagatggc
caaaaaagctactttgttccacctccacaaatgaaaaaagtgatgcatggcgatcgcgtt
atcgcggccattcatacagacaaagaccgtgaattcgctgaaccagaagaacttgttgaa
ccctttctcagccgctttgtcgggcgcattcagaagaaagataatgacaaccgcttattt
gtgatccctgatcacccactgctaaaagatgctatttcttgtcgcccagtaaaagacatc
gaccatgaatttgctcaaggtgattgggttgttgcacagatgcgtcgccatcctttaaaa
ggtgataaaggtttttacgctgatatcactgagtacatcaccgatgctaatgaccatttc
gccccttggtgggtcactttacgtcgtcatcaacttgatcgtgctgagccgcaaatggtt
cacagtgaacgcgatgatgaaggcattgagcgtgttgaccttaccgatctgcatttcgtg
actatcgacagtgcaagtacagaagatatggatgatgctctgtatattgaaagaacagca
gacggtcatttaaaactttatatcgctatcgcggatccaaccagttatatcaaagaaggc
agtgaattagataagctcgctttagctcgcgcttatacgaactacttgcctggctttaat
attccgatgttacctcgtgagctttcagataacctctgctctttacgcccaaatgagcgc
cgtccagcattagtgtgtgccgcaaccattttggatgatggtaacctagctgaagatatt
cagtttttcagtgcatgggttgagtctaaatcaaagctggtttatgacgaagtttccgat
tggctagaaaaatcaggtagctggcaaccaactaatgatgcagatcagcaacagattgaa
ttactgaaagaaatggcggataagcgtcatcaatggcgtcaacaaaatgcgttagtcttt
aaagatcgccctgactatcgtttcttattagatgacaaagggaatgttattgacatcgtc
gtcgaaagccgccgtacggcaaaccgtattgtcgaagaagcgatgatcaccgctaacttg
tgtgccgcaacacagctcaaaaacacattaggttttggcgtattcaacgttcatatgggc
tttgagccattacaaatagagcaagttgtacaaacattgaaagagcatggtattgagaca
acggccgaatccctgctcaccttagaaggtttccgccaactacgccgccaattagatgca
caaccgacacaattcttagatagccgcattcgtcgattccaaacctttgcagaagtcaaa
ggcgaacccggccctcactttggattaggttttgaggcttacgcaacgtggacatcacca
atccgtaaatacacggatattgttaaccatcgtctacttaaatcggttattgcgggtaaa
ccctcaactgataaaccgacagaagagttatcgattaaattagcggagcgtcgccgagcc
aatcgcatggctgaacgtgatgttggtgattggttatatgcgcgctttttaaaacctttc
gaaggtacagacaaggcattccctgcggaaattatcgatatcacacgtggtggtgtacga
gtgaggttaaccgacaatggtgccgtagcctttattccagcgccgttcttacacgctgta
cgcgatgagatccagtgcagccaagaaacaggtagcgtgttaatcaaaggcgaacccgca
tacaaactcaacgatattattaatgttaatatcgctgaagtacgtatggaaactcgcaat
attgttgctcgccctgccgcataa
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