Providencia stuartii ATCC 33672: DR96_3811
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Entry
DR96_3811 CDS
T03282
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase srmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psx
Providencia stuartii ATCC 33672
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psx03009
]
DR96_3811 (srmB)
Enzymes [BR:
psx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR96_3811 (srmB)
Ribosome biogenesis [BR:
psx03009
]
Prokaryotic type
rRNA helicases
DR96_3811 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
CMS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIN65353
LinkDB
All DBs
Position
4102051..4103394
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AA seq
447 aa
AA seq
DB search
MTATTFTELELDESLINALADKGYERPTAIQAAAIPAAMDGRDVLGSAPTGTGKTAAFLL
PAIQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAKELCAHNHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFANDIETIAGETRW
RKQTMLFSATLEGEAIRDFSERLLEDPVEIDAESSRRERKKIQQFYYRADNLQHKTALLC
HLLKQEDVTKSIVFVRKRERVREVVQWLRDAGIESCYLEGEMAQAKRNEAVRRLVTGQVK
VLVATDVASRGLDIDNVSHVFNFDMSRTADVYLHRIGRTGRAGRKGTAISLIEAHDYPLF
GKVSRYIEDSIKMRVIDSLRPSTKAPSESMMNKPKPSKKVLAKRKEKKKKEEESKKKTKV
RHRDKKNIGKRRKPNSSSTTPTRDNAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaccacatttactgaacttgaactcgatgaaagcctgatcaacgcgctggca
gacaaaggctatgaacgcccaactgcaattcaggctgccgctatccctgccgcaatggat
gggcgtgacgttttaggttcagcccctactggtacgggtaaaaccgccgcatttttgctg
ccagccatccaacacttacttgactttccaaggaaaaagtccggtcctccgcgagtgctg
atattaacaccaacgcgtgagctagccatgcaggttgcagaccaagcaaaagagttatgt
gcacataaccatctcgatatcgctacgattacaggcggtgtcgcgtatatgaaccatgct
gaagtttttagcgaaaaccaagatattgttgtcgcgacaacaggccgcttgcttcaatac
atcaaagaagaaaattttgactgtcgcgccgttgaaatcctgatccttgatgaagctgat
cgcatgctcgacatgggctttgccaatgacattgaaacaattgcaggtgaaacacgctgg
cgtaaacaaactatgctgttctctgctacccttgaaggcgaagctattcgtgatttttct
gaacgactgctagaagatcctgttgaaattgatgccgaatcgtcacgtcgcgaacgtaaa
aaaatacaacagttttactatcgtgccgataatttacaacacaaaacagccttgttgtgc
catctgctaaaacaagaggatgtgactaagtccattgtttttgttcgtaagcgtgagcgt
gtccgtgaagtcgtacaatggttacgagatgcaggtattgagtcttgttaccttgaagga
gaaatggctcaagcgaaacgtaatgaagccgttcgtcgtttagtgacagggcaagtcaaa
gtactcgtagcgaccgatgttgcatcgcgaggacttgatatcgataatgtcagtcatgtc
tttaactttgacatgtcgcgcaccgctgatgtgtatctccaccgtattggtcgtaccggt
cgagcaggccgcaaaggcaccgctatttcactgatagaagctcatgactatccgctgttc
ggtaaagtcagccgttatattgaagactccattaaaatgcgagtcatcgatagtctacgc
ccaagcaccaaagcaccttcagaatctatgatgaataaaccaaaaccatctaagaaagtg
ctcgcaaaacgtaaagagaaaaagaaaaaagaagaagagtccaaaaagaaaaccaaagtt
cgtcatcgtgacaaaaagaacattggcaaacgccgtaaaccaaattcctcttctacgaca
ccaactcgcgataacgctgaataa
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