Providencia stuartii ATCC 33672: DR96_732
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Entry
DR96_732 CDS
T03282
Symbol
deaD
Name
(GenBank) cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psx
Providencia stuartii ATCC 33672
Pathway
psx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR96_732 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psx03019
]
DR96_732 (deaD)
03009 Ribosome biogenesis [BR:
psx03009
]
DR96_732 (deaD)
Enzymes [BR:
psx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR96_732 (deaD)
Messenger RNA biogenesis [BR:
psx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR96_732 (deaD)
Ribosome biogenesis [BR:
psx03009
]
Prokaryotic type
rRNA helicases
DR96_732 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIN63721
UniProt:
A0AAJ1N3D3
LinkDB
All DBs
Position
complement(800981..802849)
Genome browser
AA seq
622 aa
AA seq
DB search
MTTETDISFADLGLSASILTALNDLGYEKPSPIQKQCIPLLMDGNDVLGMAQTGSGKTAA
FSLPLLHNIDPDLKAPQILVLAPTRELAVQVAEAMGDFSKHMSRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKEPKEIRIQASITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDSQLLSERRQAKFAEKIQQQFESSDLDQYRALLKKLSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRRDRNGNGFDRAERGDRSGRRERR
DVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGSHSTIELPKGMPTEV
LTHLSRARILNKPMQMQLIGDAQPFERRERRGGSRRDGGFNGERRNDREGGNRRGGHRGN
GRGRNEDHNSAAPRRRSTSHNA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagactgatatctctttcgctgatttaggtttatcagcgtctattttgact
gcactaaacgacctgggatatgaaaaaccttctccgatccaaaaacaatgtattccattg
ttaatggacggtaatgatgtgttgggtatggcacagacagggagcggtaaaaccgcagcc
tttagtctgccgctactgcacaacattgatccagatttaaaagctccgcaaattctagtc
ctagccccaacacgtgagttggcggttcaggttgctgaagcgatgggcgatttttctaaa
cacatgagccgtgttaacgtggtggccctatatggtggccagcgttacgacgtgcaattg
cgtgctttgcgccaagggccacaagttgttgtgggaacgcctgggcgtctgcttgatcat
ctgaaacgcggtacattagacctgtctaaattgaaaggcttagtactggatgaagctgat
gaaatgctgcgtatgggctttattgaagatgttgaaaacatcatgagccaaattccagca
gagcatcaaacagcgctgttttcagcgacgatgccagaaccaattcgtcgtataacacgc
cgtttcatgaaagagcctaaagaaattcgtattcaggctagcattacaacacgtccagat
attgctcaaagctattggactgtttacggcatgcgcaaaaatgaggctctggttcgtttc
ttagaagccgaagattttgacgcagcaattatttttgttcgtacaaagaatgcaacgctg
gaagtggcagaagcgcttgagcgcaacggttataacagtgctgcattgaacggtgatatg
aaccaagcgttacgtgaacaaacgctagaacgtttaaaagacggtcgtttggatattttg
atcgccactgacgttgctgctcgtggtcttgatgttgaccgtattagcttagtcgttaac
tatgacatcccaatggatgcagagtcttatgttcaccgtatcggtcgtactggccgtgca
gggcgtgctggccgtgcactcttgttcgtagagaaccgtgagcgtcgtttgctgcgtaac
gttgaacgcaccatgaagctaacgatccctgaagttgaactgccagattcacaattgcta
agtgaacgtcgtcaggcgaaatttgctgaaaaaatccaacagcaatttgaaagcagtgac
ttagaccaataccgcgcgctgttaaagaaactgtcaccgtcagaagatgttgatatggaa
acattggccgccgcgttgctaaaaatggctcaaggtgagcgtgcacttattctgccacca
gatgcaccgcgtcgcccacgtcgtgaattcaatgaccgtgatgatcgccgtcgtgatcgt
aatggcaatggctttgaccgtgcagagcgtggtgatcgtagtggtcgtcgtgagcgccgt
gatgttggcgatatggaaatgtatcgcatcgaagtcggccgtgatgatggcgtagaagtg
cgccacattgtaggggcgattgccaatgaagcggatattagcagccgttatattggtaat
atcaagctgtttggctctcactcaacgattgagctaccaaaaggcatgccaaccgaagtg
ttaactcacttaagccgtgcacgcattttgaataaaccaatgcaaatgcaattaattggt
gatgcacagccgtttgaacgtcgtgagcgtcgtggtggttcacgccgtgacggtggcttt
aatggtgagcgtcgcaacgaccgtgagggtggcaatcgtcgcggtggccatcgtggtaac
ggacgtggtcgtaatgaagatcacaactcggcagctccgcgccgccgtagcaccagccat
aatgcttaa
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