Pseudochrobactrum sp. XF203: LDL70_00505
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Entry
LDL70_00505 CDS
T10521
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf03030
DNA replication
psxf03410
Base excision repair
psxf03420
Nucleotide excision repair
psxf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL70_00505 (polA)
03410 Base excision repair
LDL70_00505 (polA)
03420 Nucleotide excision repair
LDL70_00505 (polA)
03440 Homologous recombination
LDL70_00505 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psxf03032
]
LDL70_00505 (polA)
03400 DNA repair and recombination proteins [BR:
psxf03400
]
LDL70_00505 (polA)
Enzymes [BR:
psxf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL70_00505 (polA)
DNA replication proteins [BR:
psxf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LDL70_00505 (polA)
DNA repair and recombination proteins [BR:
psxf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LDL70_00505 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LDL70_00505 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH_2
HHH
Transposase_20
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
UCA45793
LinkDB
All DBs
Position
121737..124679
Genome browser
AA seq
980 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLLKDARNTDVGVV
PTHFAVIFDYSSQTFRKEIYPEYKANRTAPPEDLIPQFGLIRQATHAFNLPCIEKEGYEA
DDIIATYARLAEEAGATVTIISSDKDLMQLVTEQVSMYDGMKDKQISIPEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGIPGIGPKTAAQLLEEFGDLDTLLARASEIKQNKRRENIIAFA
DQTRISRQLVTLKNDVPLEIDLDGLMLEPQDGPKLIGFLKAMELTTLTRRVAEATDTVAA
EIEPITVETEWGAEARGPDLDRGTDVVETSAPEKVAATISAENNGQLMRPQALVEARKAQ
GTSDKIDHSAYVGITDIAVLKDWVDQAVEQGFVAFDTETTSLDPMQAELVGFSLALAAGK
ACYVPLTHKSGQGDLLGGGLIEGQIPLNAALAELKRLLEDPSVLIIAQNMKYDWLVMHRL
GINIARFDDTMLLSYALDAGTGTHGMDVLAERWLGHTTIPYKEVAGTGKSAVTFDMVPID
RAIAYGAEDADVTLRLWQVLKPRLAADGMASVYERLERPLVEVLSRMEERGVSVDRQILS
RLSGELAQSAAAIEDEIYTLAGEKMNIGSPKQLGDILFGKLGLPGGSKTKTGQWSTSAQV
LEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGYIHSETKRVHTSYSMAVTTTGRLSSS
EPNLQNIPVRTAEGRKIRTAFVAPQGKKLISADYSQIELRVLAHVADIAQLKKAFDDGID
IHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIPREEASSYIRTYF
ERFPGIKDYMETTKAAAREQGYVETIFGRRIHYPEIKASNPQVRAFNERAAINAPIQGSA
ADIIRRAMIRMEPALADAKLDAQMLLQVHDELIFEVDDAQVDATIEVVREVMVNAAMPAV
SMAVPLQVDARAAQNWDEAH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctccggctatattttccgcgcatat
cacgccttgccgccactcacccgcaaatcagacggtttgccggttggtgcagtgtccggt
ttctgcaacatgctgtggaagctcctgaaagatgcgcgcaatacggatgtcggcgtggtg
ccgacccattttgcggttatcttcgattattcgtcacagactttccgtaaggaaatctat
ccggaatataaagctaaccgtactgccccgccggaagatctgatcccgcaattcggcctg
atccgtcaggccactcatgctttcaacctgccttgcatcgaaaaggaaggctatgaggcc
gatgatattatcgccacctatgcccgacttgccgaagaggccggtgcgacagtcacgatc
atctcatccgataaagacctgatgcagctcgtgaccgaacaagtctcgatgtatgacggc
atgaaggacaagcagatttcaatccctgaggtgattgaaaaatggggcgtgccgccggag
aagatgatcgacctgcaatcactgaccggcgattcaaccgataatgtgccgggcattccg
ggcatcgggcccaaaactgccgcgcaattgctggaagaattcggcgatctggatacgctg
cttgcccgtgcttccgagattaaacagaataaacgccgcgagaatattatcgcttttgcg
gatcagacccgtatttcgcgtcagttggtgacattgaagaatgatgtgccgctggagatt
gatctcgatggtctgatgctggaacctcaggacgggccgaagctgatcggctttctgaag
gcgatggaactgaccacgctgacccgccgtgtggcagaggccacagatacggttgcggcc
gagattgagccgattactgtggagacagaatggggtgcggaagcacgcggccctgatctt
gatcgtggcacagatgttgttgaaacttccgcaccggaaaaagtagccgcgactataagt
gcagaaaacaacggccagctgatgcggccgcaggctctggtggaagcccgcaaagcgcaa
ggcacttctgacaagatcgatcattctgcttatgttggcattaccgatattgcggtgctg
aaagactgggtcgatcaggccgttgagcagggttttgtggcttttgacaccgagacaacc
tcgcttgatccgatgcaggccgagctggtcggtttctcgctggccttggcggcaggcaaa
gcctgttacgtgccgctgacgcataaatccggtcagggtgatctgctcggcggcgggctg
attgaagggcaaattccgctgaatgcagcccttgcagaattaaagcggctgctggaagac
ccgtcagtgctgatcattgcccagaatatgaaatatgactggctggtcatgcatcgtctc
ggcattaatattgcgcgttttgacgacacgatgctgctgtcctatgcgctggatgccggt
accggcacccatggcatggatgtgctggcagaacgctggcttgggcacacaacaatccct
tataaggaagtagcgggtaccggaaaatcggccgtgacttttgacatggtgccgattgat
cgcgccatcgcctatggtgcggaggatgccgatgtcacattgcgcctgtggcaggtgctg
aaaccgcgtctggcggccgatggcatggcgtcggtttatgagcggctggaacgcccgctg
gttgaagtgctgtcacggatggaagagcgcggtgtcagcgttgaccgccaaattctctca
cgcctttccggcgagctggcgcaatcggctgcggctattgaagacgagatttatacgctt
gccggtgaaaaaatgaatatcggctcaccgaagcagctcggcgatattctgtttggcaaa
ctcggcctgccgggtggttcaaaaaccaagaccggccagtggtcgacatctgcgcaggtg
ctggaagatctggcggcggaaggccatgagctgccgcgcaagattgtggactggcgccag
cttaccaagctcaaatccacctatacggatgcattgcccggttatattcactctgaaaca
aagcgggtgcatacatcttattctatggcggtaacgacgacagggcgtctgtcttcgtca
gaaccgaacctgcagaatattccggtgcgcaccgctgaaggtcgcaaaatccgcaccgcc
tttgtggcgccgcagggtaaaaagctgatctctgccgactatagtcagattgaactgcgt
gtactcgcgcatgtggcggatattgcgcagctgaaaaaagcctttgatgacggtatcgac
attcacgcgatgacagcctctgaaatgttcggcgtaccggtagagggcatgccgtcagaa
gtacgccgccgtgctaaagcgattaatttcggtattatttacggcatttcggcctttggt
cttgccaatcagctgtcgatcccgcgtgaagaggcaagttcctatatccgtacctatttt
gagcgtttccccggtatcaaggattatatggaaacaaccaaggctgctgcgcgtgaacaa
ggctatgtcgaaactattttcggccgccgtattcattatccggagatcaaagccagcaat
ccgcaggtgcgtgcgtttaatgaacgggcggcgattaatgcgcctattcagggttcggcg
gcagatattatccgccgtgcgatgatccgcatggaaccggcactggcagatgcgaagctc
gatgcgcaaatgctgttgcaggtgcatgacgaactgatcttcgaggttgatgacgcacag
gttgacgcgaccattgaagtggtgcgtgaggtgatggtcaatgcggcaatgccggctgtt
tcgatggctgtgccgttacaggttgatgctagagccgcgcaaaactgggatgaagcgcat
tga
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