Pseudochrobactrum sp. XF203: LDL70_02380
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Entry
LDL70_02380 CDS
T10521
Name
(GenBank) DUF11 domain-containing protein
Organism
psxf Pseudochrobactrum sp. XF203
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
DUF11
DUF7619
CARDB
SdrD_B
Integrin_A_Ig_3
CarboxypepD_reg
CBM_2
SpaA
DUF7617
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
UCA46128
LinkDB
All DBs
Position
553610..561751
Genome browser
AA seq
2713 aa
AA seq
DB search
MKRLFTVFIMAVFAMFNSLSGVYAQSVTGWTLNINADKQSPLAAGTEIEFAATVNNSDNF
PTTPTSVAFTIPASVKFYGLDVDKDVFSGCAPMPAIGVELTNDAIITCEVRILQPQESVT
AKIRLSPQKEGVVVFNGKIAKNGAEQNRSITVNKGADLALTLNAPAEVKGGGKVNFTATV
KNEGPYPSKGSTLTFPVPAGVVMDQPMENGCTLSGNIVTCEIKQEIEPGQSLDFGFSGQV
TVGNSSNILIAAEVIANSPLDPDVENNKALANMKVLAGTDVSLSKVRSPQGLLLTGSPVE
FTLTPQVAGDEPSQAVIKDVLPENYEFVGFGDLAGTGWACALTGREVVCEYTKSAGSNYK
APIKINTTAVKATHDGKGAGAPVTNKATITSKNEDPDYIGNNTTDDGGASIVDPAIDLKA
HKSGPEHGLLIVGQEYEYVLRSSNIGNAAFAGELTITDHLPEGMMMVSADTPDGWSCTPA
SVPGEADVVCKTNQYTKDNPLGVGAYTAPIRLKVKMTKSGTFNNGMTVSLPDNITDVDLT
NNKVHVGGNAGSEDDKTLADLEVKKSVIGKSAVKAGEKIEFAIEIINHGDAVATSVVMDD
RIENIVAGALGDKAVVTLDVQKGSASGMVCTAPPSGAYHVNLKCDIATLPVCVSGKDCPI
VKISAFAGKEGTQRNTAHVFSTKVPDANQNNNSSFVDYTVAPVTDVTVLKSSPSQALGAA
AGQGLVYTIAARVNDNGLSGADNVVIEDKLPVGVRFVGITENGAICSTSLKEGEVVTSAN
NTITCTWARLENGTQKEVAIEVKPSTGQVGDELVNNATVSTTTEETDKTNNAASVKVKIL
APALDLLVTKTDTVDGKQHDPVEKGTNTTYLIVAKNDGPSDAYNVNIVDTFPASGFSYDK
VEGQSAGLTCLPPNVNAGQAGGTLTCSIPVLKAGTEVQFKVQMKSFVRGTYQNKVVITSD
ETAKNYDRNPANNADDETTTVRVKSDVSVIKTADKKIVDLRESFTWTLTVESLSGDGLEV
AEDVILTDTLPEGMVLTEVPEITSGKGGSCLGVIGTRQIRCELGDIEPAEKTVIKLTTKI
IDMKAEAMTNAASVTTKSFDKNSANNTSSDSVKTVLGGSVSGKIFVDFNEKADFNTGMDT
GVDGVTVTLTGIAKHDNEKLTFTVITDSNGNYNFTGVPAGEYQVSYSNVPDSSKYQTGVS
VSGTNDYNDSKTSSVNNTTLGSVVIEKDSKSIENNFTLHVTPSVGLSKVANAPVSAGDGT
YTVTYTFTAKNLSQEPLKDITLTDVLNGGAQNFGSPSADDVPQPGFYKVTSVSTNSGTLS
SAFDGATNTLIVGNAVLQPNATLIATVVVRVNPDKPWKANPLVLTNQADVTAVGEYSDKT
GIADKSDNRAGGENYPNRNVPTTVNIVPEAAIKLEKTGARIGGTGEITAGDVIEYTFKVT
NTGKTPLFDVVVTDPKTGLVWTANTKIAELAVGASNDTAFKATYVVKQTDIDNGTLENTA
RTEGTWGDFSGTPQTVTSTDKFDLPLSEPSLKFEKKLKQSDVKTPSVVGDKITYEFIVEN
TGNTTLNNVVITDELAGVVDSGVFNIGTLAPKATKTVEAYYLLKLQDINAGKVVNKALAT
GTYGPDDKKITTPPSEVEVPTYRDPKLTLVKALSSVVPEPAYAGDMLEWTVTATNEGNVT
LYNIKVSDPLVGAVIAPASLASLAPGESGTFTVKAPIQQNHLNDGQVVNTAKADFEDPTG
PQPPVDSNEVVTPLAHKPSISLEKVAILDGLSNPAKIGDELRYSFTIRNTGNVALNSLVL
TDHLEGVVIDAADLTRLETLTLQPVNAAKDNDAEVQTVVYGTYKLKVADINAGKVENTAD
VKGIPEYGDKTPVTDDSSTDTPLDRDPSIKLVKTLEASSLPKPAKAGDVIKFNFAVHNTG
NVTLEKIRIVDLVTDVQVVNQSGWTGPLEPGEVNTDAFTATYALKQSDIDAGVFANTAQV
FGSSVNGMPDDVTDISGTDLTNDDKTVVELETSASVTIVKSETHAFSSPTQVGEVITYSF
LVTNTGNLTLTNVIVEDPLVGLVPDMPFTIATLLPGDANAVTLTATYKVTQADIEKGEVV
NQATVTGDYVDPADKTKKPVTPDVSEEIKVPLEQKPGIAVVKEANSKLTEPAEAGQEIEY
TFTVHNTGNMVLNNVVLNDPLAGITPNSFTIGTMQPGEQQVFTATYAITEADIDAEKVVN
QATVKGTYGDPTTPKDIEDPSGPTVDTDEPTIVPVMPPLPELTIKKSGYWNDANGNGYPE
VGETIEYSFEVKNVGNALLNNVTVQDEGPLFAGQRGTNKLSAITPTSVTLKPNDHQTFTA
TYVLSQADIDAAAGIPDMVTNTAFAKGEQRNGKPYESEEDPAKVNLPATEPSLVTITKQA
LLHQVRRGDRVPYIIKVENTSSSNVGLLNIIDTMPSGFRYVEGTATVNGEKTEPEISGRR
LSFDRQPMGANSTIEIRLELLVLSSAGPGKHINIATVTDKDGKPVAPDAQAIVEIMSEPV
FDCGEIIGTVFDDKNRNGYQDEGEKGLAGVRVATVKGWLITTDEYGRFHVPCAAMPDQRI
GSNFIMKLDNRTLPTGYRLTTENPRVVRLTAGKMTKLNFGASISRVVRLDLQDAAFEANR
VELKKQWADNLPQLVEILKQEISVLRLSYKMAGNEQSLAKQRMKHVRKQIADLWKRKGDN
YPLEIETRVEVSK
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggttatttacagtgtttatcatggcggtttttgccatgttcaactctctgtct
ggcgtttatgcgcaaagcgtaacaggctggacactcaatattaatgctgacaaacaaagt
ccgctggcggccggtactgagattgagtttgcggcgactgtaaataacagtgataatttc
ccgaccacgccgacgagcgttgcatttacgatcccagcatcggttaagttttacggcctt
gatgttgataaggacgttttcagcggttgcgccccaatgcctgccattggcgtagagctg
actaacgatgcgataattacctgtgaagtgcgtatacttcagccgcaggaaagcgtaacc
gctaaaatccgtttgagccctcagaaagagggtgttgtcgtttttaatggtaaaattgcc
aagaacggcgctgagcagaaccgcagcattactgttaacaaaggcgctgacttagccctg
acattgaatgctcctgctgaagttaagggcggtggcaaagttaactttaccgcgactgtt
aaaaatgaaggcccgtatccgtcaaagggttcaacacttaccttccctgtccctgcaggt
gttgtgatggaccagccgatggaaaatggctgcacattgtcgggcaatattgtcacttgt
gaaatcaaacaggaaattgaaccaggccagtctctggattttggcttttccggacaggta
acagtcggaaacagctctaacattctgattgcggctgaggtgattgcaaactcaccactc
gatccggacgttgaaaataataaagcacttgcaaatatgaaggttcttgccggtacggat
gtgagtctgagcaaggtgcgctccccgcaaggtcttctcctaaccggttctccggttgaa
tttactttgacgccacaggttgccggtgatgagccttcacaagcggttatcaaagatgtt
ttgccggaaaattatgaatttgttggttttggagatctggccggcaccggttgggcttgt
gctttaaccggcagagaagtggtgtgtgaatataccaaatccgctggcagcaactataaa
gcaccgatcaaaattaatactacagctgttaaggcaacccatgacggtaagggagccggt
gcgcctgttaccaataaagcgacaataacatctaaaaatgaagaccctgattatattggt
aacaataccactgatgacggcggcgcgagcattgttgatccggcgattgatttaaaggcg
cacaaatccggccctgagcatggtttgctcatcgttggtcaagaatatgaatatgttctc
agaagcagcaatattggaaatgccgctttcgctggcgaactgacgataacagatcatctg
cctgagggcatgatgatggtatcggcagatacgcctgatggttggtcttgtactccggct
tctgtcccgggtgaggccgatgttgtttgtaaaacaaaccagtacacaaaagataatccg
cttggcgttggtgcctataccgccccgatcaggctgaaggtcaaaatgaccaaaagcggc
acatttaacaacggtatgaccgtttcgctgccggataatattacagacgtcgatttaaca
aataataaagttcatgttggcggtaatgcgggttccgaagacgacaaaactctggctgat
ctggaagtcaaaaagtccgtcatcggcaaatcggctgtaaaagccggtgaaaaaatcgag
tttgctatcgaaatcatcaatcatggtgacgcagtggcaacctcggttgtcatggatgat
cgtattgagaatattgttgcaggcgcactgggcgataaggcggttgttacccttgatgtg
cagaagggcagtgcaagcggcatggtgtgtacggcaccgccgagcggtgcctatcatgtc
aatctgaaatgcgacattgcaaccttgccggtttgtgtgtcgggcaaagattgccctatt
gttaaaattagtgcttttgcgggtaaagaaggcacgcagcgcaatacggcgcatgttttc
tccaccaaagttccggatgcaaatcagaacaataattcttcctttgttgattacactgtt
gcaccggtaacggatgttactgttctgaaatccagcccgtcacaggcacttggtgcagcc
gcaggtcaggggctggtttataccattgctgcccgtgtcaatgataatggtctgagtggt
gcggacaatgttgttattgaagataagttgccagtcggtgttcgtttcgttggtattacc
gaaaatggcgcaatctgttcgacaagcctcaaggaaggtgaggtcgtcacttccgccaat
aacaccatcacctgtacatgggcgcgtctcgaaaacggcacccagaaagaagtggctatt
gaagttaagccttcgaccggtcaggttggagatgagcttgtcaataatgcaacggtcagc
accacgactgaagaaacagacaagaccaacaatgctgccagcgttaaggtgaaaatcctt
gcacctgcgcttgatcttttggtgaccaaaaccgatacggttgatggcaagcaacatgat
ccggtcgaaaaaggcaccaatacaacttatctgattgtagccaaaaatgatggcccgtcg
gatgcgtataatgtcaatattgttgatacatttccggcgtccggtttttcctatgataaa
gtagagggtcagtcggcaggccttacctgtttaccaccaaatgtgaatgctggtcaggca
ggcggtacgcttacttgttctattccggtgcttaaagccggtactgaagtgcagttcaaa
gtccaaatgaagtcttttgtacgcggcacttatcagaacaaagttgtaataacttctgac
gaaacagcgaaaaactatgaccgtaatccggctaataatgcggatgatgaaacaaccact
gttcgtgtgaagtccgatgtcagcgttattaaaacagctgataaaaaaattgttgacttg
cgtgaaagttttacttggacgcttacggttgaaagcctgtcaggtgacggccttgaggtt
gctgaagatgttattctcacagacactttgccggaaggtatggtgctgactgaagttcct
gagattaccagcggtaaaggtggttcgtgtctcggtgttatcggtacacgtcagatcaga
tgtgaactcggtgatatagaaccggcggaaaaaacagtcattaaacttaccaccaagatt
atagatatgaaggcagaggcaatgaccaatgccgcttctgtcacgacaaaatcttttgac
aaaaactcagcgaataatacatctagcgatagtgttaaaactgttctcggtggttcggta
agcggtaaaatcttcgtcgatttcaacgaaaaagctgatttcaatactggtatggatacc
ggcgtcgacggtgtgaccgttactctgactggtattgccaagcatgataatgagaagctt
acttttacagtaatcacggatagcaatggtaattataatttcacaggcgttcctgccggt
gaatatcaggtcagctacagcaatgtgccggacagcagcaaataccagaccggtgtttct
gtgtctggtaccaatgattataatgatagcaagacctcatcagtgaacaacacaaccctt
ggttcggttgtcattgaaaaagattccaagagtattgaaaataacttcacactccacgtc
acgccttcggttggcctgagcaaggtagccaatgcacctgtttcagcgggtgatggtact
tatactgtcacatatacattcacggccaaaaacctcagtcaggaaccgttgaaagacatc
acgctgacggatgttctgaatggtggcgcacagaattttggttctccatcagcggacgat
gttccgcagccagggttctacaaagttacatccgtcagcacgaacagcggcactttgtcg
tctgcttttgatggggcaaccaatacgctgatcgttggtaatgccgtgctgcagccaaat
gcaacgctgattgccactgtagtcgtgcgggttaatcctgacaaaccatggaaagccaat
ccgcttgttctgaccaatcaggccgacgttacagcagtcggtgaatattccgataaaacc
ggcattgcggacaagtcagataacagagccggtggtgaaaactatccgaaccggaatgtg
ccgacgactgttaatattgtgccggaagcagcgattaagctggaaaaaaccggtgcgcgc
attggcggaactggcgagattacagccggtgacgtgattgagtatacattcaaagttacc
aataccggtaaaacaccgctctttgatgtggttgtaaccgatccgaaaactggtctggtc
tggactgcgaatacaaagattgcagaactcgccgttggtgccagtaatgatacggccttt
aaagcgacctatgtcgtcaaacagacagatattgataatggtacgctggaaaatacagcg
aggactgaaggtacttggggtgactttagcggcacgccgcaaacggttacttcaactgac
aaatttgacctgccgctgagtgaaccttctctaaaatttgagaagaaactgaagcagtca
gacgttaagaccccgtcagttgtcggtgacaagatcacctatgaattcatcgtcgagaat
accggtaacacgacattgaacaatgtagtgattacggatgaattggctggtgtggtggat
agcggtgtctttaacatcggtacacttgcaccgaaagcaacgaagactgttgaggcttat
tatctgctgaaattgcaggatattaatgccggaaaagtcgtcaataaagcactggccacc
ggcacttatggtcctgatgacaagaagatcaccacaccgccttcagaagtagaagttccg
acttaccgtgatccgaagctgacgcttgtaaaggcattaagctcggttgtgccggaacca
gcctatgccggtgatatgctggaatggactgtgacagcgaccaacgagggcaatgtcact
ctctataatatcaaagtcagcgatccgctggtgggtgcagttatcgcaccggcatctctt
gcttcattggcaccgggtgaaagtggtacatttacggttaaagcaccgatccagcagaac
catctgaatgatggtcaggtggtcaacactgccaaggctgattttgaagacccgactggc
ccgcaaccgccggtggattctaatgaagttgtaacgccgcttgcacataagccttcgatc
agccttgagaaggtggctattcttgatggtctgagcaatccggcaaagatcggtgatgaa
cttcgctacagcttcactatccgcaataccggtaacgtcgcgcttaatagtctggttctg
accgatcatctcgagggtgttgttattgatgctgctgatctgacacgtctggaaacattg
actttgcagccggtcaacgctgctaaagacaatgacgcggaagttcagactgttgtttac
ggtacttataagctgaaggttgccgatattaatgccggtaaggttgaaaacaccgccgat
gttaagggtattcctgagtacggtgacaagacaccggtaacggatgacagcagcaccgat
acaccactggatcgtgatccttccatcaagctggtcaaaacacttgaagcctcttcattg
ccgaagcctgctaaggctggtgacgttatcaagttcaactttgccgttcacaataccggc
aatgtgactctggaaaagatccgcattgttgatctggttaccgatgtgcaggtcgtcaat
cagtccggctggactggtccgttggagccgggtgaagttaacacggatgcgttcactgca
acctatgcattgaaacagtctgatattgatgcaggtgtttttgccaacacggcacaggta
ttcggctcaagtgtaaacggtatgccggatgacgtaaccgatatttccggtactgatctg
acgaatgacgataaaaccgttgtggagttggaaacctcggcatcggtgacgattgtcaaa
tcggaaacccatgctttttcttcaccgacacaggtgggtgaagtcatcacctattccttc
ctcgtcaccaatacaggcaatctgacactgaccaatgtcattgtggaagatccgcttgtt
ggtctcgtgccggatatgcctttcaccattgcgacattgttgccgggggatgcgaatgcg
gtcacgctgacagcaacttataaagtcacacaagccgatattgaaaaaggtgaagtcgtc
aatcaggccactgttaccggtgactatgttgaccctgccgataagaccaaaaaaccggta
acaccggatgtttcagaggaaattaaagttccgctggagcagaagccgggtattgctgtt
gtcaaggaagcgaactccaagctgaccgaaccggcagaagccggacaggaaattgaatat
acattcactgtccataataccggtaatatggtgctgaataatgtggttctgaatgatcca
ttggcaggtatcacaccaaacagctttaccattggcacaatgcagccgggtgagcagcag
gtattcacagccacttacgccattactgaagcggatattgatgccgaaaaggttgttaat
caggcaacagtgaagggtacctatggcgatccgactaccccgaaagacattgaagatcct
tcaggcccgacagtggatacagatgagccgactattgtgccggttatgcctccgctgcct
gaattgacgattaagaaaagcggttattggaatgatgctaacggtaatggctatcctgaa
gttggcgaaaccattgaatatagtttcgaggtaaagaatgtcggtaatgcgctgctcaac
aatgtgactgtgcaggatgaaggtccgctttttgctggtcagcgcggcaccaataagctg
tctgccattacacctacatcagtgacattgaagccaaacgatcaccagacttttacggcc
acttatgtgctgtcacaggcggatattgatgcagcggccggtattccggatatggtgacc
aataccgcttttgccaaaggtgagcagcgtaacggtaagccatatgaatccgaggaagat
ccggcaaaagtcaatctgcctgccacagaaccgtctttggtaacaattaccaaacaggca
ttgttacatcaggttcgtcgtggtgatcgcgtaccttacatcattaaggtcgagaacact
tcgtcgagcaatgtaggtttgctgaatatcatcgatactatgccttccggtttccgctat
gttgaaggaacggctactgtaaatggtgaaaaaactgagccggagatcagtggtcgtcgt
ctcagctttgatagacagccgatgggcgcaaacagcacgatcgagatccgtcttgaactg
ctggttctgagctcggcaggtcccggcaagcatatcaatattgccaccgtaacggacaag
gacggcaagccggttgcacctgatgcacaggcgattgtcgagatcatgtctgaacctgtt
ttcgactgtggtgaaatcatcggcactgtctttgatgacaagaaccgcaatggttatcag
gacgaaggcgaaaaaggtctggccggtgtgcgtgttgcaaccgttaaaggctggctgatc
acaacggacgaatatggtcgtttccatgtgccttgtgcggcgatgccggatcagcgcatc
ggttccaatttcatcatgaagcttgataaccgcacgctgccaacaggctaccgtctgacg
actgaaaacccgcgtgttgtccgtctgactgccggtaaaatgaccaagctgaactttggt
gcatcgatcagccgtgttgttcgtcttgaccttcaggatgcagcttttgaagcaaaccgc
gtcgagctgaaaaagcagtgggctgacaacctgccgcaactcgtggaaatcctgaaacag
gaaatctcggttctgcgtctgagctacaaaatggcaggcaatgagcagtcgctggccaaa
caacgtatgaaacatgttcgcaagcagatcgctgatctgtggaagcgcaaaggagataac
tacccgcttgaaatcgagacacgcgtggaggtgagcaaatga
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integrated database retrieval system