Pseudochrobactrum sp. XF203: LDL70_02460
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Entry
LDL70_02460 CDS
T10521
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
psxf Pseudochrobactrum sp. XF203
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psxf02000
]
LDL70_02460
Transporters [BR:
psxf02000
]
Other transporters
Pores ion channels [TC:
1
]
LDL70_02460
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
STN
DUF5777
Opacity
Motif
Other DBs
NCBI-ProteinID:
UCA46143
LinkDB
All DBs
Position
581897..585394
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AA seq
1165 aa
AA seq
DB search
MLALVTRTGSGSKIQQVFKTTLLASALYLALVPYGATDAFAQATTPYSFSIPPQPLAQAL
VRFSAVTGVDIAFDGALPSNIRSNTLQGTYSAASGLEQLLEGTNLTYRFSGASTALIINP
AQTSGNRLGAVDEGTVLLDTITISGGTGISAADAPYQTLGSSAYISADEIEARRGTSPGD
IFSGIPGVLNGESRNSGGVDVNIRGMQGQGRVPVIVDGASQEVSVYRGYNGSQSRSYIDP
DFIGGMAIEKGPSNGADATGATGGVVRISTIKAEDILLPGETFGARLKGGFVSNSSGVPA
LGTPAGLGSNNDIGLDRPGAFVPTSGNGSVAIAKTSENFDIVAAYARRKTGNYHAGTHGY
DADLSKFRPGEEVLNTSTDNTSWMLKGNVRWDGGHSLELGYTKYLSEYGEIMPTQLSLFG
GVPYQGFLNKIDLDTYTGRYGWKPDDSDLFDVRLDTFLTKMDLRINSSLYSSGYPIGLVD
YYTGQTRWGATLSNTSLFATSLGDFSLNYGTSFTRENVGLPSGYEFASAGTAGTTPAPRM
GNREEWSGFATMDWQPLDWLTLSPSLRYSRFHSFDRAPKLSNTGDLIFGSPLETEASGWS
PLGTIKIEPVDNLQLYAKAGSVLRSPSIFESLTSLSFTVQPDENPIRPERNRTVELGVNY
MADDAFLAGDKLRLHAAYFDNHVKDYITRAEGTGGLRRINLDYADMRGFEVSGEYDTGQY
FGGLAWNHYTHVMFCAPEGVMSARHSTCAPGGIYNSFAVQQVPPKDTVAIHLGGRFLDDK
LTLGGRMTYVGKRMVKGLGDGTVETGLTNIRPGSWNPYVLLDLYATYEPNENVHMRFSVD
NVTDRYYMDALSASLMPAPGRTFRFDLTIKPSLEGAYSGDGSLFSGLTSTSEAETVTTDW
TGFFVGANIGMDWSKLSGTTTALNGTSNAYAANESAALDLSGASFGLQAGYNHQFSNGFV
AGFEADISKPTFSGNQTTYSTESADYKDGTIQSVQDYQYDVAASAKAKFGYAFNRMFVYG
TGGIALMNEVQTRDQYISTGATSSMLGGTGTKFNYSEQEEVTRLGFTLGAGMEYALSDKW
SIKADYNYTRFSSKTFNFDGAASGVVAPYDERIRCGRVNRPAACPPGFNGFHNVSSSGTG
AKIDGRKAENKLQNHSIKVGLNYRF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctggcattagtaacacgaaccggatccggttcgaaaatccagcaggtcttcaaaacc
acactgctcgcatcggccttatatcttgcattggtgccatatggggcgacagatgctttt
gctcaggcgacaacgccttacagtttctccattccgccacagccattggcacaggcgtta
gtccgtttttctgcggttaccggcgtagatattgcctttgacggagcgttaccatcaaac
atccgttcaaacaccttacagggcacatattcagcggccagcggactggagcaacttctt
gaaggaacaaatctgacctatcggttcagcggcgcttcaaccgcactgataatcaatccg
gctcaaacgtccggcaatcgtctcggcgctgtcgatgagggtactgttcttcttgataca
attacaatttcgggcggaaccggtataagcgcggcagacgcaccatatcaaacgctagga
tcaagcgcctatatatccgctgatgagatcgaagcacggcgtggcacatcaccaggggat
attttctcaggcattccgggcgttttgaacggagaatcgcgcaactccggcggagttgat
gtcaatatccgcggtatgcaggggcaagggcgcgtaccggtcatcgtggatggcgcttcg
caggaagtgtctgtgtatcgcggttataacgggtcgcaatcacgctcttatattgatcct
gatttcattggtggcatggctattgaaaaagggccaagcaacggtgcagatgctaccggc
gcaacgggtggtgtggtacgcatcagcacaatcaaggcggaggatattcttctgcccggt
gagacttttggtgcacgtctcaaaggaggctttgtttccaatagttcgggcgttcctgct
ctcggcacgcctgcaggactaggcagcaataatgacattggtttggatcgccctggcgca
tttgtcccgacatcaggtaatggcagcgttgccattgcaaaaacatccgagaatttcgat
atagtcgcagcctatgcccgacgtaaaaccggaaattaccacgcgggcacacatggatat
gatgccgacctcagcaaattccgccctggcgaagaagtactcaatacttcgacagacaat
acatcctggatgttaaaagggaatgttcgctgggatggcggacattcgctggagcttggc
tataccaaatatctcagcgaatacggcgagatcatgccaacccaattatctctgtttggc
ggtgtaccatatcagggctttcttaataaaattgatctggacacttatacaggccgctat
ggctggaagcctgatgatagtgacctctttgatgtgcggcttgatacatttctcacaaaa
atggatttgcgtatcaattcatctctgtattcttcaggctacccgatcgggctcgtcgat
tattatacaggccagacacgctggggtgcgacgctttccaatacgtctttgttcgcaaca
agccttggtgatttttcattgaactatggcacatctttcaccagagagaatgtaggcctg
ccgagcggctacgaatttgcatcagccggtacagctggcacgacgcccgcaccaagaatg
ggtaaccgcgaggagtggagcggttttgccacaatggactggcagcctcttgattggctg
acactttcgccaagtctgcgttactcccgctttcattcctttgatcgcgcgccaaagctt
tccaataccggtgatctgatatttggttcacccttggagactgaagcatcgggttggtcg
ccgcttggcacaatcaaaattgagccggtcgataatctgcaactctatgccaaggctggc
agcgtgctgcgatcgccgagtatttttgaatctctcaccagcctgtcctttacagttcag
cctgatgaaaatcctatccgtccggagcgcaatcgcactgtggaactgggtgttaattac
atggcggatgatgctttcctcgctggcgataagctcaggctacatgccgcttatttcgat
aaccatgtcaaggattacatcacccgtgcagaaggcaccggtgggctgagacgcatcaat
ctcgactacgctgatatgcgcggtttcgaagtgtccggagaatatgacactggccagtat
ttcgggggacttgcctggaaccattatacccatgtcatgttctgtgcaccagaaggggta
atgtctgcacgccattcaacctgtgcgccgggaggcatttataatagttttgctgttcag
caggtgccgccaaaggatactgtggccattcatttaggggggcgttttctggacgacaaa
ctgacccttggcggacgtatgacctatgtcggaaagcgtatggtgaaaggtctaggtgat
ggtacagttgaaaccggtttaacgaatatccgccccggcagctggaacccctatgtgctg
cttgatctctatgcaacctatgagccgaacgaaaacgtacacatgcgtttctcggtcgat
aatgttacagaccgctactatatggatgcgctgagtgcctcgctgatgcctgcacccggg
cgcactttccgatttgatctcacaatcaaaccatcccttgagggagcatatagtggcgac
ggatcgctgttctcaggcttaacctcaacaagcgaagcagaaactgtgaccacggactgg
acaggcttctttgtaggggcaaatattggcatggactggtcgaaactcagtggcacaaca
acagccctgaatggcacatccaatgcctatgccgctaatgaatcggctgcactcgatctc
tccggtgcgtcctttggattacaggcaggttataatcaccagttttcaaacggctttgtt
gcaggctttgaagcagatatttcaaagccaaccttttcaggcaatcaaacaacctattcg
actgaatccgcagattataaggatggcaccatccagtcagtgcaggactatcagtatgat
gtcgcggcttctgccaaggcaaaatttggctacgccttcaacaggatgtttgtttacggt
acgggcggaatagcactgatgaatgaagtgcagacgcgggatcaatatatttcaaccggt
gcaacatcttctatgttgggtggaacaggaacgaaattcaattattctgaacaggaagag
gtaacccgtctcgggttcacactcggcgctggtatggaatatgctttgagtgataaatgg
tcgataaaggctgattataactacacaagatttagttccaaaacattcaatttcgacggt
gcagcttcaggtgtcgttgccccctatgatgagcgtattcgatgcggtcgggttaacagg
cctgcagcatgcccgccaggtttcaacggatttcataatgtcagctcaagtggtacgggc
gcaaaaatcgacggtcgtaaagccgaaaataaattacaaaaccacagcatcaaagtgggt
ttgaactatcgtttctga
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