Pseudochrobactrum sp. XF203: LDL70_03180
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Entry
LDL70_03180 CDS
T10521
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psxf Pseudochrobactrum sp. XF203
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psxf03009
]
LDL70_03180
Enzymes [BR:
psxf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LDL70_03180
Ribosome biogenesis [BR:
psxf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LDL70_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UCA46271
LinkDB
All DBs
Position
751263..753185
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AA seq
640 aa
AA seq
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MTRDDHDNERGKRPFVKRERTRDDRGSDRPRRFEGESRGDKPRGFGERGDKPRGFEPRGD
KPRGFDMSAAEEGERIAKRLARVGIASRREAESMIAAGRVAVNGKVLTSPAVNVLRTDRI
TVDNKVLQQAERTRLWLYHKPAGLVTTNRDPEGRPTVFDALPAELPRVLSVGRLDINTEG
LLLLTNDGGLSRVLELPATGWLRRYRVRAHGTVTQAQLDELKNGIAVDGVFYGAVEATLE
REQGANVWLSIGLREGKNREVKNILGALGLAVSRLIRVSFGPFQLGDLEEGAVREIRGRT
LREQLGEKLVEDSGADFDAPILNEFSNEAVKGELPSRSPRFDAYEERGSDEEGEGRSRYK
SDWISSSRNAGGGRGGKGGFGAKRGEGRMDGERKPFRRDREDGDRREEGRAPRDGERKPF
QRDRDGKSWREDGLSRLSTSAPRSGGFDKPRFAKGGRGDKDDDKFGSQPQRPRGVNVWMA
PGAKAYNSSSKPTPGDDRRRSRRDGDDRPQREEGGRGYQGRSEDRDGYKRQGFRRDEDNR
DGFKREGFRSENRRSFDEGDRPAREERRFSGERNFDKKPFGDKKPFGDRPSGDKPFRGKP
EGGRGGKPFGKGPQGGKPSGNRPSGPRGAGPRSGPRGDKR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgacgatcatgataatgaacgcggcaagcgtccttttgtaaagcgtgagcgt
acgcgcgatgacagaggttctgaccgtccgcgtcgttttgaaggtgaatcccgtggtgac
aagccgcgcggcttcggtgagcgcggcgacaaacctcgtggttttgaacctcgcggcgat
aagccccgcggctttgatatgagtgccgctgaagaaggcgaacgtatcgccaagcgtctg
gcgcgtgtgggtattgcctcgcgccgtgaagcggaaagcatgattgctgccggtcgtgtt
gctgtaaacggtaaagtgctgaccagcccagccgtcaatgttctgcgcacagatcgtatt
accgttgataataaagtgctgcagcaggctgaacgtactcgtctgtggctctatcacaaa
cctgccggtctggtgacaaccaaccgtgatccggaaggtcgtccgacagtgtttgatgca
ctgcctgctgaattgccgcgcgttttgtcggtcggtcgccttgatatcaacaccgaaggc
ctgttgctgctgaccaatgatggcggtctgtcccgcgttctggaactgcctgctaccggc
tggctgcgccgctaccgcgtgcgcgctcacggtacagtaacacaggcacagcttgatgag
ctgaaaaacggtatcgctgttgacggcgtgttctacggcgcggttgaggcaactctggag
cgcgagcaaggcgccaatgtctggctgtccattggtctgcgcgaaggcaaaaaccgcgaa
gttaagaatattcttggtgcgcttggtctggccgtttcccgcctgatccgcgtttctttc
ggtccgttccagctgggcgatctggaagagggcgcggtgcgcgaaatccgtggccgtacc
ctgcgtgaacagctcggtgaaaaactggttgaagattccggtgcggattttgatgcgccg
atccttaatgaattctccaatgaagcggttaagggcgaattgccgtcccgcagcccgcgt
tttgatgcctatgaagagcgtggcagcgacgaggaaggtgaaggccgttcccgttacaaa
tccgactggatttccagcagccgcaatgcaggcggcggccgtggcggcaaaggtggcttt
ggtgccaagcgtggcgaagggcgtatggacggtgagcgtaaaccgttccgccgtgaccgt
gaagacggtgaccgtcgtgaagaaggccgtgcgccgcgtgatggtgagcgcaagcctttc
cagcgtgatcgcgatggcaagagctggcgtgaagatggcctttcacgcctcagcacatct
gcaccgcgttccggcggtttcgacaagccgcgctttgcgaaaggcggccgtggtgacaag
gatgatgacaagttcggttcacagccgcagcgtccgcgcggcgtgaatgtatggatggca
ccgggtgccaaggcctataattcctcgtccaagccgaccccgggtgatgatcgccgccgt
tcacgccgtgacggtgatgaccgtccgcagcgtgaagaaggcggtcgcggttatcagggg
cgttcagaggacagagacggttataagcggcagggtttccgccgtgatgaagacaatcgc
gacggtttcaagcgcgaaggcttccgttcggaaaaccgtcgttcttttgatgaaggcgat
cgtccggcacgcgaagagcgtcgtttctccggtgagcgcaattttgacaagaagccattt
ggtgacaaaaagccgtttggtgaccgtccgtcgggcgacaaaccattccgtggcaagcct
gaaggcggtcgcggtggcaagcctttcggtaaaggcccgcagggtggtaaaccatccggc
aaccgtccgtccggtccccgtggtgcaggtccacgttccggcccgcgcggagataaacgt
taa
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