Pseudochrobactrum sp. XF203: LDL70_04440
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Entry
LDL70_04440 CDS
T10521
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psxf Pseudochrobactrum sp. XF203
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDL70_04440 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psxf03019
]
LDL70_04440 (rnc)
03009 Ribosome biogenesis [BR:
psxf03009
]
LDL70_04440 (rnc)
03036 Chromosome and associated proteins [BR:
psxf03036
]
LDL70_04440 (rnc)
Enzymes [BR:
psxf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LDL70_04440 (rnc)
Messenger RNA biogenesis [BR:
psxf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LDL70_04440 (rnc)
Ribosome biogenesis [BR:
psxf03009
]
Eukaryotic type
90S particles
RNase
LDL70_04440 (rnc)
Prokaryotic type
rRNA processing factors
LDL70_04440 (rnc)
Chromosome and associated proteins [BR:
psxf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LDL70_04440 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UCA46495
LinkDB
All DBs
Position
1032153..1032857
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AA seq
234 aa
AA seq
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MVSDRQRIKILEEKTGHSFVDHARLERALTHSSARPQSGSNYERLEFLGDRVLGLIIAEM
LFAAFPDAPEGELSVRLNALVSAEGCASVADEIGLGDLIETGSDIKSLNDKRLLNVRADV
IEALIATIYLDGGLEAARGFVLKYWEPRSRVSDAARRDAKTELQEWAHQQGKQQGKLQPV
YRIVSRTGPDHEPVFVVEVAISGFQPATGTGRSKRIAEQDAAENLLHRQGVWQK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgatcgccagcgtataaaaatactggaagaaaaaaccggtcatagctttgtc
gatcatgcgcgccttgagcgcgcattgacacattccagcgcacggccgcaatccggttcc
aattatgagcggctggaatttctcggtgaccgcgttctagggctgattattgcggaaatg
ctgtttgcggcttttcccgatgcgccggaaggtgaattgtccgtgcgcctgaatgcgctg
gtcagtgctgagggctgtgcatccgttgccgatgaaatcggtctgggtgatctgatcgaa
accggttccgatatcaaaagcctcaatgacaagcgcttgctgaatgtgcgcgccgatgtg
attgaagcactgattgccacgatctatctggatggtggcttggaagctgcacgtggtttt
gtgctcaaatattgggagccgcgctccagagtgagcgatgcggcgcgccgtgatgctaaa
actgaattgcaggaatgggcacatcagcagggcaaacagcaaggcaaactgcaacctgtt
taccgcattgtcagccgcactggtcccgaccatgagcctgtctttgtggtggaagtggca
atttccggttttcagccggcaaccggaacaggacgttccaaacgtattgccgagcaggat
gccgctgaaaatctgttgcaccgccaaggtgtctggcagaaataa
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