Pseudochrobactrum sp. XF203: LDL70_05020
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Entry
LDL70_05020 CDS
T10521
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psxf Pseudochrobactrum sp. XF203
Brite
Enzymes [BR:
psxf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LDL70_05020 (rnd)
Transfer RNA biogenesis [BR:
psxf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LDL70_05020 (rnd)
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NCBI-ProteinID:
UCA46598
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Position
complement(1147622..1148776)
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AA seq
384 aa
AA seq
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MELITTTQGLEQAVSQLSKSDFVTVDTEFIRETTFWPELCLIQMASPDTTALVDALAPGI
DLSSFFALMADKSVVKVFHAARQDIEIVFHLGNLIPEPVFDTQVAAMVCGFGDAISYDQL
VARITGVNLDKSSRFTDWRRRPLSDKQLDYALADVTHLRDVYLYLQDRLTKEGRNDWVSE
EIRILTARETYDMHPDDAWKRLKIRLRKPAELAVMQKVAAWRERAARERNVPRGRVIKDD
TIQEIAQQQPRDAEALSRLRTIPKGWERSSHAQGLVEAINEALSIPKEDMPRLPKQYNAP
EGTGAASDVLKLLLKIITEDHGVAPKVVASSDDIDQIAAKGNAADVPALKGWRRELFGEK
ALQMIEGKIGIKFENRKIKAVPLD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaactcattacgacaacacagggtcttgaacaggccgtttcacagctttcaaaatct
gattttgtcactgtggataccgaattcattcgtgaaaccactttctggccggaactttgc
ctgatccagatggcatcgccggacacaacggcattggtggatgcactggcaccgggcatt
gatctcagctctttcttcgccctgatggcggataaatctgtcgtcaaagtgtttcacgca
gcgcggcaggatattgaaatcgttttccacctcggaaatctgatccctgagccggtattc
gacacacaggtcgcagcgatggtttgcggttttggcgatgccatttcttatgaccagctg
gttgcgcgtatcaccggtgtaaatctggacaagtcgtcccgctttaccgactggcgccgc
cgtccgctgagcgacaaacagctggattacgcactggccgatgtgacccatctgcgcgat
gtttatctctatttgcaggatcgtctgaccaaagaaggccgcaatgactgggtgagcgaa
gaaatccgcattcttaccgcccgcgagacctatgacatgcatcctgacgatgcgtggaag
cgtctgaaaatccgcctgcgtaagcctgccgaactggcagtcatgcagaaggttgccgca
tggcgtgaacgtgcagcacgtgaacgcaatgttccgcgcggtcgtgtaatcaaagacgat
acgattcaggaaatcgcccagcagcagccgcgcgatgcggaagcactgtcccgcctgcgt
actattccgaaaggctgggagcgctcctctcatgcgcaaggtttggttgaagcgatcaat
gaagcactgagcattccgaaagaggatatgccacgcctgccgaagcaatataacgcgccg
gaaggtaccggtgcggcctctgacgtgctgaaactgctgcttaagatcatcaccgaagat
cacggtgtagcaccgaaagttgtcgcttcttccgatgatattgatcagattgctgccaag
ggtaatgcagcggatgtaccggctctgaagggctggcgtcgtgagcttttcggtgaaaaa
gcactgcaaatgattgaaggcaaaatcggcatcaagtttgaaaaccgcaagatcaaggca
gttccgctggattaa
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