Pseudochrobactrum sp. XF203: LDL70_09050
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Entry
LDL70_09050 CDS
T10521
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDL70_09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psxf03021
]
LDL70_09050
03400 DNA repair and recombination proteins [BR:
psxf03400
]
LDL70_09050
Enzymes [BR:
psxf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDL70_09050
Transcription machinery [BR:
psxf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDL70_09050
DNA repair and recombination proteins [BR:
psxf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDL70_09050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UCA44547
LinkDB
All DBs
Position
complement(1995904..1996917)
Genome browser
AA seq
337 aa
AA seq
DB search
MIQKNWQELIKPNKVDFLTQGSKNKVTVVAEPLERGYGLTLGNALRRVLLSSLRGAAVTA
VQIDGVLHEFSSINGVREDVTDIVLNVKEIAIRMEGDGPKRMVVRKEGPGVVTAGDIQTV
GDVEILNPDHVICTLDEGAEIRMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSLYSPVRK
VSYKIENTREGQVLDYDKLILNVETNGSVTGEDAVAYAARILQDQLAIFVNFDEPQKEAP
QEQVAELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSL
NEIKEVLASMGLHLGMEIPTWPPENIEDLAKRYEDQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaactgatcaagcctaacaaggttgattttcttacccag
ggctcgaagaataaggtcactgttgtggctgagccgcttgaacgcggttacggtctgaca
ttgggtaacgcgctgcgtcgcgttcttctttcttcgctacgcggtgctgcggtgactgct
gttcagattgacggcgttctgcatgaattctcgtcgatcaacggcgtgcgtgaagacgta
accgatatcgtactgaatgttaaagaaatcgctatccgtatggaaggcgatggacctaag
cgcatggttgtccgcaaggaaggaccaggcgtcgtaacggctggtgatatccagacggtt
ggtgatgttgaaatccttaatccggatcacgtcatctgcaccctcgatgagggcgctgaa
atccgcatggaattcactgtcaatacgggcaagggctatgtgcctgctgaccgtaaccgc
gctgaagatgctccgatcggtcttattccggttgacagcctctattcaccggtacgtaag
gtttcctacaagatcgaaaacacccgtgagggacaggttctcgattatgacaagctgatc
ctcaatgttgagaccaacggctctgtcactggtgaagatgcagttgcttatgcagcccgc
attcttcaggaccagcttgcgatcttcgtcaactttgacgagccgcagaaggaagctccg
caggaacaggttgctgaactcgcattcaatccggctctgcttaagaaagtggatgaactg
gaactgtctgtccgttctgcaaactgcctgaagaacgataacatcgtttatatcggcgat
ctgatccagaagacagaagccgaaatgctgcggactccgaatttcggccgcaagtcgctg
aacgaaatcaaagaagttctggcgtcgatgggactccatctcggtatggaaatcccgacc
tggccgccggaaaatatcgaagatctcgctaagcgctacgaagatcaatattga
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